Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC116337.2-201ENST00000477662 156 ntBASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 MRPS36P2-201ENST00000512569 299 ntBASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 AC090132.2-201ENST00000615881 347 ntBASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 AL160394.1-201ENST00000624765 724 ntBASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDKL3Q8IVW4 AC022336.2-201ENST00000568966 2538 ntBASIC2.34□□□□□ -2.04
CDKL3Q8IVW4 AL356473.1-201ENST00000406203 1408 ntBASIC2.34□□□□□ -2.04
CDKL3Q8IVW4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 RNU6-28P-201ENST00000362378 107 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 HMGB1P17-201ENST00000403495 628 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AL592310.1-201ENST00000414330 671 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC107081.1-201ENST00000414975 361 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 MORF4L1P6-201ENST00000418771 268 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AL512844.2-201ENST00000433990 593 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 MTND4P6-201ENST00000438297 472 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 SDCBPP1-201ENST00000440192 890 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 snoU109.3-201ENST00000459477 145 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 HSPE1P6-201ENST00000479457 291 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC147055.4-201ENST00000504399 745 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 TTC39CP1-201ENST00000512513 755 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 MTCYBP20-201ENST00000524239 1129 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AP001646.1-201ENST00000527936 915 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC023824.2-201ENST00000566185 400 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 BNIP3P26-201ENST00000600827 554 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AL390208.1-201ENST00000605885 644 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC026790.2-201ENST00000606282 430 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC006213.4-201ENST00000616184 634 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AL109620.1-201ENST00000618738 1197 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AL596245.1-201ENST00000618994 362 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 MIR6130-201ENST00000619419 109 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 AC005832.2-201ENST00000538921 1430 ntBASIC2.33□□□□□ -2.04
CDKL3Q8IVW4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 RNU6-560P-201ENST00000364007 108 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 RNU6-76P-201ENST00000384060 104 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 SPA17P1-201ENST00000416656 452 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AC009963.1-201ENST00000417265 157 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 RPS3AP37-201ENST00000419176 745 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 MTCO2P5-201ENST00000422621 426 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AL139421.1-201ENST00000423010 169 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AC098614.2-201ENST00000426040 255 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 MTCYBP3-201ENST00000445588 1137 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 MTCO2P25-201ENST00000447065 681 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 RNU7-23P-201ENST00000459465 62 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AC010486.1-201ENST00000511793 424 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AC006499.2-201ENST00000513470 337 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AC093677.1-201ENST00000514414 678 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 RNU6-928P-201ENST00000516876 104 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 MTCYBP23-201ENST00000558717 1102 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 ISCA1P3-201ENST00000577104 373 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AC013553.2-201ENST00000604244 589 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AC025034.2-201ENST00000623264 286 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 AL445984.1-201ENST00000637834 659 ntBASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CDKL3Q8IVW4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 RNU4-82P-201ENST00000362443 140 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 RNU6-270P-201ENST00000364131 105 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 SNORA6-201ENST00000384033 151 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AL445529.1-201ENST00000398713 389 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AL136310.1-201ENST00000404926 654 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 MTATP6P20-201ENST00000414147 562 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 TPMTP2-201ENST00000414372 726 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms