Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AC107871.2-201ENST00000612894 502 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 RNU6-289P-201ENST00000364093 107 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 RNU6-76P-201ENST00000384060 104 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 RNA5SP247-201ENST00000411181 105 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 RPS15AP38-201ENST00000413110 372 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 MTATP6P27-201ENST00000416987 621 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 RPL21P32-201ENST00000419877 477 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC004866.2-201ENST00000438285 481 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 MTND5P14-201ENST00000441481 1267 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 ART2BP-201ENST00000453501 499 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 RPL23AP11-201ENST00000475260 469 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 LINC00888-204ENST00000487386 421 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 NRBF2P1-201ENST00000587407 859 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AL596327.1-201ENST00000603629 213 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC018638.7-201ENST00000605836 1114 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC080013.4-201ENST00000607624 649 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC024560.3-201ENST00000608482 349 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC046143.2-201ENST00000609789 160 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC004696.1-201ENST00000614345 607 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC079416.3-201ENST00000624479 549 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC097655.1-201ENST00000635075 318 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 AC007671.2-201ENST00000637344 619 ntBASIC3.35□□□□□ -1.87
NPHP3Q7Z494 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPHP3Q7Z494 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPHP3Q7Z494 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.34□□□□□ -1.87
NPHP3Q7Z494 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPHP3Q7Z494 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NPHP3Q7Z494 SSXP9-201ENST00000417503 292 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 MTND1P20-201ENST00000430341 950 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 RAC1P7-201ENST00000445367 377 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AL133217.1-201ENST00000450980 425 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 USP9YP10-201ENST00000454868 628 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 RNU7-125P-201ENST00000458760 62 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 RPL36AP51-201ENST00000487216 318 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 RPS3AP22-201ENST00000488297 769 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AC010486.2-201ENST00000505572 483 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 MRPS33P3-201ENST00000513456 322 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 ERHP1-201ENST00000523006 310 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AC008015.1-201ENST00000555505 465 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.34□□□□□ -1.87
NPHP3Q7Z494 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AC004987.4-201ENST00000603383 338 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AC018714.1-201ENST00000605028 208 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AC012443.1-201ENST00000605605 231 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AL390208.1-201ENST00000605885 644 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AL360219.1-201ENST00000610230 366 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AC002076.2-201ENST00000617362 122 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AL353997.5-201ENST00000618886 171 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 AL356596.1-201ENST00000624230 379 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 SNORA50A-202ENST00000629536 136 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 LRRC77P-213ENST00000637727 880 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 CRYM-AS1-204ENST00000637983 556 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 MTND5P6-201ENST00000422338 1798 ntBASIC3.34□□□□□ -1.87
NPHP3Q7Z494 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.34□□□□□ -1.88
NPHP3Q7Z494 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
NPHP3Q7Z494 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
NPHP3Q7Z494 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 AC092881.1-201ENST00000638218 2733 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 AC097714.1-201ENST00000511272 1647 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 RNU6-433P-201ENST00000363216 104 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 Y_RNA.169-201ENST00000363745 96 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 RNA5SP456-201ENST00000364002 114 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 RNU6-882P-201ENST00000391025 103 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 AC002381.1-201ENST00000447049 280 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 ARPC3P5-201ENST00000448802 534 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 HMGN2P23-201ENST00000456759 269 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 RNA5SP310-201ENST00000459084 116 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 HMGN2P13-201ENST00000476476 274 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 AC008716.1-201ENST00000511084 513 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.33□□□□□ -1.88
NPHP3Q7Z494 AC093677.1-201ENST00000514414 678 ntBASIC3.33□□□□□ -1.88
NPHP3Q7Z494 AC026464.5-201ENST00000562497 722 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms