Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNE3Q6ZMZ3 AC110774.1-201ENST00000623567 2018 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 Y_RNA.3-201ENST00000362331 103 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 RNU6-173P-201ENST00000364215 104 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 RNA5SP267-201ENST00000364893 126 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 RNY3P13-201ENST00000365542 102 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 RNU6-805P-201ENST00000365643 106 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 SNORA36C-201ENST00000384289 132 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 MIR34B-201ENST00000385076 84 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC063979.1-201ENST00000415539 377 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 USP9YP36-201ENST00000424581 829 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC024082.2-201ENST00000434771 238 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AL662791.1-201ENST00000441992 928 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 ELOCP30-201ENST00000447108 299 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 RN7SL601P-201ENST00000471221 293 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 RPL7P49-201ENST00000471402 708 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC004924.1-201ENST00000480160 781 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 RPL23AP55-201ENST00000498163 452 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC108078.1-201ENST00000508073 725 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC074250.1-201ENST00000511117 192 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 RN7SKP244-201ENST00000516513 307 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 Vault.3-201ENST00000516676 95 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 ERHP1-201ENST00000523006 310 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC022616.3-201ENST00000523940 148 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 SNRPGP16-201ENST00000533275 226 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 MIR3167-201ENST00000579623 85 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC004067.1-201ENST00000608733 700 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AL591516.1-201ENST00000611326 274 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC004696.1-201ENST00000614345 607 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC013476.2-201ENST00000614456 459 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 AC110994.2-201ENST00000635481 492 ntBASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNE3Q6ZMZ3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
SYNE3Q6ZMZ3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
SYNE3Q6ZMZ3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AL136164.4-201ENST00000625013 2135 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 OR1S2-201ENST00000302592 978 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 RPL7P26-201ENST00000333817 754 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 SNORD56.3-201ENST00000363507 71 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 U3.11-201ENST00000364476 212 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 RPS3AP36-201ENST00000398190 775 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AC110754.1-201ENST00000399740 601 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 RNA5SP293-201ENST00000410527 113 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 RNA5SP229-201ENST00000410809 99 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 ELOCP17-201ENST00000414751 326 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AL031779.1-201ENST00000415663 330 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AL158156.1-201ENST00000422509 473 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 VDAC1P3-201ENST00000434069 851 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AC091153.1-201ENST00000466297 402 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 HMGB1P29-201ENST00000505659 499 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 MLLT10P2-201ENST00000506434 249 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 RN7SKP289-201ENST00000517244 295 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 MED28P6-201ENST00000558776 231 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AL391840.1-201ENST00000571144 367 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 MIR4474-201ENST00000579189 78 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AC068790.6-201ENST00000602558 258 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AC008277.2-201ENST00000605196 797 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AL021997.1-201ENST00000605757 193 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 CR848007.1-201ENST00000442354 1699 ntBASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNE3Q6ZMZ3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms