Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RMST_8.1-201ENST00000610287 165 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF220Q5VTB9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.82□□□□□ -1.8
RNF220Q5VTB9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AL354685.2-201ENST00000448218 1447 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC118273.1-201ENST00000525324 3006 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 RNU1-132P-201ENST00000364300 164 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 MIR301A-201ENST00000385261 86 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 UBE2V1P2-201ENST00000397758 440 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 RPS4XP3-201ENST00000398541 413 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 RNU6-1068P-201ENST00000410958 103 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 USP9YP6-201ENST00000413550 854 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 RPL21P109-201ENST00000422213 475 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AL160275.3-201ENST00000423876 471 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 BTF3P10-201ENST00000433415 495 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC122718.1-201ENST00000439448 744 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 RBMX2P4-201ENST00000441256 376 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 RPS29P31-201ENST00000446147 164 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC104058.1-201ENST00000448028 297 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 NFU1P2-201ENST00000448700 469 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 FABP5P15-201ENST00000453566 214 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 FAM133DP-201ENST00000464802 691 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 RPL31P58-201ENST00000469001 379 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 RN7SL303P-201ENST00000469773 251 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC109327.1-201ENST00000471666 403 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AL135752.1-201ENST00000479477 471 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 EIF4EP3-201ENST00000498782 656 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC099522.1-202ENST00000514718 367 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 SUMO2P20-201ENST00000520803 283 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC022655.2-201ENST00000577280 318 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC002076.2-201ENST00000617362 122 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 MIR6076-201ENST00000617521 113 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AC010338.1-201ENST00000621823 717 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AL512643.1-201ENST00000635735 524 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 Z99571.1-201ENST00000636677 394 ntBASIC3.81□□□□□ -1.8
RNF220Q5VTB9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF220Q5VTB9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 RNA5SP295-201ENST00000362655 121 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 RNU6-451P-201ENST00000362921 107 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 RNA5SP366-201ENST00000365454 123 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AL606923.1-201ENST00000406616 190 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 FAR2P2-201ENST00000413041 594 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC083863.1-201ENST00000438811 231 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 RPS29P33-201ENST00000456717 146 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC011276.1-201ENST00000469688 323 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AF213884.1-201ENST00000488102 463 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 TVP23BP1-201ENST00000557500 617 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC015917.1-201ENST00000579654 510 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 BRDTP1-201ENST00000605735 677 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AL357559.1-201ENST00000622228 274 ntBASIC3.8□□□□□ -1.8
RNF220Q5VTB9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms