Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SDHCP2-201ENST00000398565 501 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 RNU6-394P-201ENST00000410735 107 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.96□□□□□ -1.46
RC3H1Q5TC82 NUTF2P3-201ENST00000448540 384 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.96□□□□□ -1.46
RC3H1Q5TC82 COX6CP14-201ENST00000469580 174 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.96□□□□□ -1.46
RC3H1Q5TC82 RPL7P47-201ENST00000497299 556 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.96□□□□□ -1.46
RC3H1Q5TC82 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 AC090151.1-201ENST00000520784 730 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 CYCSP29-201ENST00000533731 318 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RC3H1Q5TC82 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.96□□□□□ -1.46
RC3H1Q5TC82 AC174048.1-201ENST00000603389 144 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 AL078605.1-201ENST00000603529 500 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 FP236240.3-201ENST00000623061 327 ntBASIC5.96□□□□□ -1.46
RC3H1Q5TC82 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.96□□□□□ -1.46
RC3H1Q5TC82 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RC3H1Q5TC82 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 Y_RNA.533-201ENST00000384596 114 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 RNU6-959P-201ENST00000384671 107 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 Y_RNA.581-201ENST00000391017 97 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 SCARNA10-201ENST00000459255 330 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 AC022034.3-201ENST00000471393 478 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 RN7SL810P-201ENST00000493031 276 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 AC073073.1-201ENST00000493920 463 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 AC074250.1-201ENST00000511117 192 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 AC093023.1-201ENST00000547375 507 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.95□□□□□ -1.46
RC3H1Q5TC82 EOGT-210ENST00000615922 1931 ntBASIC5.95□□□□□ -1.46
RC3H1Q5TC82 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 STX3-208ENST00000641815 3236 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 RNY4P28-201ENST00000365281 93 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 RNU6-1293P-201ENST00000384077 107 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 SNORA22C-201ENST00000384614 134 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 MIR659-201ENST00000384963 97 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 MIR134-201ENST00000385258 73 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 RNU6-700P-201ENST00000391043 107 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 Z98745.1-201ENST00000402553 494 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 COX5BP7-201ENST00000414780 274 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 VTI1BP4-201ENST00000427516 527 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AC006946.1-201ENST00000429106 328 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 MTND3P9-201ENST00000429526 346 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AC073063.1-201ENST00000434352 607 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AC127537.2-201ENST00000439258 465 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 Z95327.1-201ENST00000446082 482 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 GAPDHP27-201ENST00000447427 1020 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 RPL21P129-201ENST00000491732 478 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AC040958.1-201ENST00000561102 201 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AL121917.1-203ENST00000605534 577 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AC023043.4-201ENST00000612081 449 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AL590240.4-201ENST00000616908 390 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 ZYXP1-201ENST00000617638 118 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 RNU6-156P-201ENST00000621869 107 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AC110801.1-201ENST00000623590 212 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 RNA5SP196-201ENST00000625967 102 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 AP001148.1-201ENST00000624124 2359 ntBASIC5.94□□□□□ -1.46
RC3H1Q5TC82 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RC3H1Q5TC82 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RC3H1Q5TC82 SNORD50.1-201ENST00000362987 71 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 RNU1-130P-201ENST00000363930 160 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 Y_RNA.398-201ENST00000383952 99 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 RNU6-637P-201ENST00000384050 107 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 RNU6-417P-201ENST00000384712 107 ntBASIC5.93□□□□□ -1.46
RC3H1Q5TC82 AL591034.2-201ENST00000402839 359 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms