Protein–RNA interactions for Protein: Q12996

CSTF3, Cleavage stimulation factor subunit 3, humanhuman

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3Q12996 RNU6-188P-201ENST00000364207 107 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 RNU4-75P-201ENST00000364621 146 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 RN7SKP111-201ENST00000410349 271 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 ZNF90P2-204ENST00000419323 1075 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 PIGFP2-201ENST00000421400 651 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.32□□□□□ -1.88
CSTF3Q12996 DLGAP5P1-201ENST00000430307 464 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 USP9YP14-201ENST00000430663 563 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AL358934.1-201ENST00000432346 324 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.32□□□□□ -1.88
CSTF3Q12996 AL353705.1-201ENST00000433468 480 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.32□□□□□ -1.88
CSTF3Q12996 MTCO3P5-201ENST00000433620 714 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.32□□□□□ -1.88
CSTF3Q12996 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSTF3Q12996 HIGD1AP11-201ENST00000438361 280 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.32□□□□□ -1.88
CSTF3Q12996 AC013267.1-201ENST00000458227 267 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 RPL37P6-201ENST00000460682 294 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 RPL21P8-201ENST00000465083 535 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 KC877373.1-201ENST00000479066 408 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC006445.2-201ENST00000510061 472 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.32□□□□□ -1.88
CSTF3Q12996 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.32□□□□□ -1.88
CSTF3Q12996 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.32□□□□□ -1.88
CSTF3Q12996 AP006587.4-201ENST00000526053 529 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AP003392.2-201ENST00000527269 208 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.32□□□□□ -1.88
CSTF3Q12996 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.32□□□□□ -1.88
CSTF3Q12996 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.32□□□□□ -1.88
CSTF3Q12996 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.32□□□□□ -1.88
CSTF3Q12996 RPS3AP4-201ENST00000555161 764 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 TRAV28-201ENST00000557548 323 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.32□□□□□ -1.88
CSTF3Q12996 AC034105.3-201ENST00000565294 442 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC034105.4-201ENST00000568304 277 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.32□□□□□ -1.88
CSTF3Q12996 AL391840.1-201ENST00000571144 367 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC005951.1-201ENST00000576706 485 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC004223.2-201ENST00000590309 544 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC091805.2-201ENST00000603848 235 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC007619.2-201ENST00000605743 379 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AP002360.4-201ENST00000606980 481 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC006111.3-201ENST00000622137 383 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.32□□□□□ -1.88
CSTF3Q12996 LRRC77P-213ENST00000637727 880 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSTF3Q12996 AL049641.1-201ENST00000441055 1948 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
CSTF3Q12996 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSTF3Q12996 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSTF3Q12996 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSTF3Q12996 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.31□□□□□ -1.88
CSTF3Q12996 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CSTF3Q12996 ZNF285B-201ENST00000561698 1767 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 MTND5P27-201ENST00000428871 1720 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSTF3Q12996 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSTF3Q12996 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSTF3Q12996 AC073343.1-201ENST00000328239 651 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 RNA5SP124-201ENST00000362739 110 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 RNU6-169P-201ENST00000365336 107 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AP002088.1-201ENST00000382740 395 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 RNU2-33P-201ENST00000410344 192 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 RAB9AP3-201ENST00000412737 573 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.31□□□□□ -1.88
CSTF3Q12996 RPL7P46-201ENST00000425129 740 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AC133104.1-201ENST00000429100 218 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.31□□□□□ -1.88
CSTF3Q12996 GOT2P5-201ENST00000433995 546 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 Z82210.1-201ENST00000440037 231 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.31□□□□□ -1.88
CSTF3Q12996 AC008264.1-201ENST00000447612 367 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AC079448.1-201ENST00000449377 373 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 RAB9AP1-201ENST00000449393 573 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AC004924.1-201ENST00000480160 781 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 KCTD9P5-201ENST00000504141 1170 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AC110768.1-201ENST00000509222 400 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 SAP18P1-201ENST00000512058 390 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 RNU1-95P-201ENST00000516357 160 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 RNU1-128P-201ENST00000516704 160 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CSTF3Q12996 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.31□□□□□ -1.88
CSTF3Q12996 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.31□□□□□ -1.88
CSTF3Q12996 AGGF1P4-201ENST00000568249 801 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AC067852.3-201ENST00000589177 561 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AC006557.5-201ENST00000603126 811 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.31□□□□□ -1.88
CSTF3Q12996 AC099842.1-201ENST00000619919 596 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.31□□□□□ -1.88
CSTF3Q12996 CR392039.5-201ENST00000623201 510 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AC139792.2-201ENST00000624218 587 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AC068880.5-201ENST00000624331 290 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.31□□□□□ -1.88
CSTF3Q12996 MTND1P37-201ENST00000636562 264 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 AC068137.4-201ENST00000638485 296 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 FAM35BP-202ENST00000497389 3337 ntBASIC3.31□□□□□ -1.88
CSTF3Q12996 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CSTF3Q12996 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms