Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.99□□□□□ -2.09
SYCNQ0VAF6 MIR6075-201ENST00000620782 95 ntBASIC1.99□□□□□ -2.09
SYCNQ0VAF6 AC002064.3-201ENST00000623448 346 ntBASIC1.99□□□□□ -2.09
SYCNQ0VAF6 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.99□□□□□ -2.09
SYCNQ0VAF6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SYCNQ0VAF6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYCNQ0VAF6 AC093831.2-201ENST00000624393 3427 ntBASIC1.99□□□□□ -2.09
SYCNQ0VAF6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
SYCNQ0VAF6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYCNQ0VAF6 AP003122.5-201ENST00000527668 3766 ntBASIC1.99□□□□□ -2.09
SYCNQ0VAF6 AL445523.1-201ENST00000451184 1362 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 RNU1-109P-201ENST00000383960 147 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 RNU5A-2P-201ENST00000384337 116 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 RNU6-278P-201ENST00000390945 109 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 HIST1H2APS3-201ENST00000403259 134 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AL139397.2-201ENST00000404529 772 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 ZNF90P2-204ENST00000419323 1075 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 FCF1P1-201ENST00000432690 571 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AL512286.1-201ENST00000439244 400 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AL672167.3-201ENST00000465951 960 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 FTH1P2-201ENST00000466086 412 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 RPL30P6-201ENST00000475925 342 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 RPS3AP22-201ENST00000488297 769 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC074250.1-201ENST00000511117 192 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 MRPS33P3-201ENST00000513456 322 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 SNORA31.3-201ENST00000516029 96 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC022616.6-201ENST00000520479 119 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 ZNF519P3-201ENST00000557158 1032 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 MIR3146-201ENST00000580367 79 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 KC877982.1-201ENST00000602313 470 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC107871.2-201ENST00000612894 502 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC100793.4-201ENST00000613683 429 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 MIR7112-201ENST00000616126 65 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 uc_338.12-201ENST00000616344 181 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC104010.1-201ENST00000616889 150 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC079248.2-201ENST00000623779 326 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 AC093591.3-201ENST00000634516 308 ntBASIC1.98□□□□□ -2.09
SYCNQ0VAF6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SYCNQ0VAF6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 SNORA63.1-201ENST00000362493 131 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 RNU6-1167P-201ENST00000363227 94 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 SNORA71.1-201ENST00000364523 117 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 MIR34B-201ENST00000385076 84 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 SNORD115.1-201ENST00000391109 76 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 SNORA48.7-201ENST00000391302 135 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 MIR888-201ENST00000401186 77 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 ELOCP17-201ENST00000414751 326 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 MTND5P25-201ENST00000430499 799 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 AC022018.1-201ENST00000430685 241 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 MTND1P28-201ENST00000435623 950 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 WASF1P1-201ENST00000447560 1131 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 ZNF114P1-201ENST00000453500 292 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 RPL12P25-201ENST00000455592 494 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 RPS29P2-201ENST00000479278 136 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 RPS27P26-201ENST00000494583 239 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 AC112204.1-201ENST00000502591 103 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 RPF2P2-201ENST00000504693 896 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 RNA5SP290-201ENST00000517133 127 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 RNU6-232P-201ENST00000517144 64 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 MTND4LP18-201ENST00000526864 291 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 MIR4429-201ENST00000580105 73 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC1.97□□□□□ -2.09
SYCNQ0VAF6 AP003399.1-201ENST00000637534 361 ntBASIC1.97□□□□□ -2.09
SYCNQ0VAF6 PABPC1P9-201ENST00000426076 1612 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms