Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.6□□□□□ -1.99
CD47Q08722 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.6□□□□□ -1.99
CD47Q08722 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.6□□□□□ -1.99
CD47Q08722 AC093156.1-201ENST00000440382 670 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.6□□□□□ -1.99
CD47Q08722 MTATP6P26-201ENST00000445926 662 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CD47Q08722 AP000936.2-201ENST00000447151 681 ntBASIC2.6□□□□□ -1.99
CD47Q08722 ST13P20-201ENST00000447996 1065 ntBASIC2.6□□□□□ -1.99
CD47Q08722 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.6□□□□□ -1.99
CD47Q08722 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.6□□□□□ -1.99
CD47Q08722 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.6□□□□□ -1.99
CD47Q08722 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.6□□□□□ -1.99
CD47Q08722 AC090525.1-201ENST00000479116 478 ntBASIC2.6□□□□□ -1.99
CD47Q08722 HSPE1P6-201ENST00000479457 291 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AL049874.1-201ENST00000489560 388 ntBASIC2.6□□□□□ -1.99
CD47Q08722 RPS15AP36-201ENST00000492022 382 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AC080014.1-201ENST00000496877 1201 ntBASIC2.6□□□□□ -1.99
CD47Q08722 DSTNP2-201ENST00000504533 515 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AC093534.1-201ENST00000504977 132 ntBASIC2.6□□□□□ -1.99
CD47Q08722 VN1R104P-201ENST00000505115 1009 ntBASIC2.6□□□□□ -1.99
CD47Q08722 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.6□□□□□ -1.99
CD47Q08722 TBCAP3-201ENST00000512475 312 ntBASIC2.6□□□□□ -1.99
CD47Q08722 PSMA2P1-201ENST00000526365 646 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AP003181.2-201ENST00000528941 181 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AP003122.4-201ENST00000530980 758 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AL356057.1-201ENST00000533798 831 ntBASIC2.6□□□□□ -1.99
CD47Q08722 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.6□□□□□ -1.99
CD47Q08722 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.6□□□□□ -1.99
CD47Q08722 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
CD47Q08722 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.6□□□□□ -1.99
CD47Q08722 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.6□□□□□ -1.99
CD47Q08722 SETP2-201ENST00000553886 926 ntBASIC2.6□□□□□ -1.99
CD47Q08722 H3F3AP1-201ENST00000559984 334 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.6□□□□□ -1.99
CD47Q08722 OR10AB1P-201ENST00000609613 938 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.6□□□□□ -1.99
CD47Q08722 AC009159.1-201ENST00000618386 642 ntBASIC2.6□□□□□ -1.99
CD47Q08722 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AC009268.2-201ENST00000621925 457 ntBASIC2.6□□□□□ -1.99
CD47Q08722 CR381653.2-201ENST00000624041 768 ntBASIC2.6□□□□□ -1.99
CD47Q08722 AL136313.1-201ENST00000624804 202 ntBASIC2.6□□□□□ -1.99
CD47Q08722 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.6□□□□□ -1.99
CD47Q08722 AC092593.1-201ENST00000515413 1815 ntBASIC2.6□□□□□ -1.99
CD47Q08722 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CD47Q08722 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CD47Q08722 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CD47Q08722 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
CD47Q08722 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.59□□□□□ -1.99
CD47Q08722 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CD47Q08722 SNORD46.1-201ENST00000364139 104 ntBASIC2.59□□□□□ -1.99
CD47Q08722 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.59□□□□□ -1.99
CD47Q08722 AL138885.1-201ENST00000405921 675 ntBASIC2.59□□□□□ -1.99
CD47Q08722 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.59□□□□□ -1.99
CD47Q08722 RNU4-65P-201ENST00000410473 140 ntBASIC2.59□□□□□ -1.99
CD47Q08722 UBE2FP1-201ENST00000416536 447 ntBASIC2.59□□□□□ -1.99
CD47Q08722 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.59□□□□□ -1.99
CD47Q08722 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.59□□□□□ -1.99
CD47Q08722 AC244035.1-201ENST00000430042 390 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.59□□□□□ -1.99
CD47Q08722 MTND1P28-201ENST00000435623 950 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.59□□□□□ -1.99
CD47Q08722 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.59□□□□□ -1.99
CD47Q08722 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.59□□□□□ -1.99
CD47Q08722 MTND1P9-201ENST00000453775 944 ntBASIC2.59□□□□□ -1.99
CD47Q08722 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.59□□□□□ -1.99
CD47Q08722 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.59□□□□□ -1.99
CD47Q08722 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.59□□□□□ -1.99
CD47Q08722 AL359385.1-201ENST00000456509 365 ntBASIC2.59□□□□□ -1.99
CD47Q08722 ARL4AP2-201ENST00000507378 601 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.59□□□□□ -1.99
CD47Q08722 AC117532.1-201ENST00000514638 323 ntBASIC2.59□□□□□ -1.99
CD47Q08722 SCGB1D5P-201ENST00000515134 247 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.59□□□□□ -1.99
CD47Q08722 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.59□□□□□ -1.99
CD47Q08722 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.59□□□□□ -1.99
CD47Q08722 AC107934.1-201ENST00000522215 217 ntBASIC2.59□□□□□ -1.99
CD47Q08722 ERHP1-201ENST00000523006 310 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.59□□□□□ -1.99
CD47Q08722 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.59□□□□□ -1.99
CD47Q08722 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.59□□□□□ -1.99
CD47Q08722 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.59□□□□□ -1.99
CD47Q08722 AL356432.3-201ENST00000568952 465 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC012493.2-201ENST00000595083 291 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.59□□□□□ -1.99
CD47Q08722 AP001981.2-201ENST00000603241 418 ntBASIC2.59□□□□□ -1.99
CD47Q08722 YPEL5P2-201ENST00000605553 359 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC007038.2-201ENST00000608095 740 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC131902.3-201ENST00000611767 581 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC073114.1-201ENST00000612027 490 ntBASIC2.59□□□□□ -1.99
CD47Q08722 TUG1_2.1-201ENST00000614234 87 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC090132.2-201ENST00000615881 347 ntBASIC2.59□□□□□ -1.99
CD47Q08722 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CD47Q08722 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.59□□□□□ -1.99
CD47Q08722 AC099654.13-201ENST00000639774 207 ntBASIC2.59□□□□□ -1.99
CD47Q08722 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.59□□□□□ -1.99
CD47Q08722 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
CD47Q08722 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
CD47Q08722 MTND4P4-201ENST00000439033 1366 ntBASIC2.59□□□□□ -2
CD47Q08722 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms