Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.91□□□□□ -1.94
SCN1BQ07699 AL139824.2-201ENST00000458731 1095 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 SNORD105B-201ENST00000458770 79 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 AC025518.1-201ENST00000479856 347 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SCN1BQ07699 AC113155.1-201ENST00000511141 769 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
SCN1BQ07699 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 AC106038.2-201ENST00000520706 568 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 AP003181.2-201ENST00000528941 181 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 GLYCAM1-201ENST00000546596 285 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.91□□□□□ -1.94
SCN1BQ07699 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.91□□□□□ -1.94
SCN1BQ07699 ROCK1P1-201ENST00000573767 549 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SCN1BQ07699 DUSP12P1-201ENST00000612874 516 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 AC025594.3-201ENST00000613068 790 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.91□□□□□ -1.94
SCN1BQ07699 AL121772.2-201ENST00000614331 297 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 AC092140.2-201ENST00000618027 521 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 SNORD39.4-201ENST00000620099 78 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 FRG1KP-201ENST00000623592 341 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.91□□□□□ -1.94
SCN1BQ07699 ZNF285B-201ENST00000561698 1767 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SCN1BQ07699 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.91□□□□□ -1.94
SCN1BQ07699 AC026241.1-201ENST00000517873 2142 ntBASIC2.9□□□□□ -1.94
SCN1BQ07699 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.94
SCN1BQ07699 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
SCN1BQ07699 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SCN1BQ07699 SMIM11P1-201ENST00000369586 178 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 RNU6-817P-201ENST00000391083 104 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN1BQ07699 RPL26P27-201ENST00000414397 437 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 Z99497.1-201ENST00000421282 135 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AL365203.2-201ENST00000423444 196 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AL356583.2-201ENST00000426536 280 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 MED14P1-201ENST00000430517 648 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN1BQ07699 SETP8-201ENST00000435341 628 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN1BQ07699 AC093156.1-201ENST00000440382 670 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 UBE2D3P4-201ENST00000441973 436 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 CYCSP35-201ENST00000451978 304 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN1BQ07699 RPL23AP70-201ENST00000483361 460 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 MTND1P3-201ENST00000484956 952 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN1BQ07699 RNA5SP337-201ENST00000517007 109 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 RNU1-45P-201ENST00000517191 141 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN1BQ07699 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.9□□□□□ -1.95
SCN1BQ07699 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.9□□□□□ -1.95
SCN1BQ07699 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.9□□□□□ -1.95
SCN1BQ07699 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.9□□□□□ -1.95
SCN1BQ07699 AC106785.1-201ENST00000565935 262 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AC145350.1-201ENST00000567426 208 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN1BQ07699 AC112191.3-201ENST00000604371 277 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AC012468.1-201ENST00000604888 430 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AL031775.1-201ENST00000607014 887 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 MIR7851-201ENST00000610611 160 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AC138749.5-201ENST00000611461 208 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AC116165.2-201ENST00000616705 206 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 AC007494.3-201ENST00000624660 743 ntBASIC2.9□□□□□ -1.95
SCN1BQ07699 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.9□□□□□ -1.95
SCN1BQ07699 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
SCN1BQ07699 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
SCN1BQ07699 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SCN1BQ07699 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCN1BQ07699 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SCN1BQ07699 Y_RNA.169-201ENST00000363745 96 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 SNORD56.5-201ENST00000364281 72 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 RNU5E-6P-201ENST00000365574 115 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SCN1BQ07699 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN1BQ07699 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SCN1BQ07699 FO393413.1-201ENST00000402892 195 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 RNU6ATAC-201ENST00000408749 126 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCN1BQ07699 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN1BQ07699 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN1BQ07699 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCN1BQ07699 AL353729.1-201ENST00000425044 720 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN1BQ07699 HMGB1P9-201ENST00000429856 646 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN1BQ07699 COX6CP12-201ENST00000446748 202 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN1BQ07699 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN1BQ07699 AC139453.3-201ENST00000493276 369 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 RN7SKP43-201ENST00000516173 320 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 RNU2-10P-201ENST00000516375 211 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 RNU6-1092P-201ENST00000516955 87 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN1BQ07699 AC011979.2-201ENST00000527568 352 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms