Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
GABPAQ06546 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3□□□□□ -1.93
GABPAQ06546 FAT1P1-201ENST00000406588 507 ntBASIC3□□□□□ -1.93
GABPAQ06546 TPMTP3-201ENST00000411928 735 ntBASIC3□□□□□ -1.93
GABPAQ06546 MTND1P21-201ENST00000412991 285 ntBASIC3□□□□□ -1.93
GABPAQ06546 TMEM167AP1-201ENST00000423409 219 ntBASIC3□□□□□ -1.93
GABPAQ06546 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3□□□□□ -1.93
GABPAQ06546 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3□□□□□ -1.93
GABPAQ06546 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3□□□□□ -1.93
GABPAQ06546 OR2B8P-201ENST00000432841 938 ntBASIC3□□□□□ -1.93
GABPAQ06546 AC092573.2-201ENST00000434546 243 ntBASIC3□□□□□ -1.93
GABPAQ06546 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3□□□□□ -1.93
GABPAQ06546 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
GABPAQ06546 AC093392.2-201ENST00000450682 337 ntBASIC3□□□□□ -1.93
GABPAQ06546 AL359385.1-201ENST00000456509 365 ntBASIC3□□□□□ -1.93
GABPAQ06546 ATG12P2-201ENST00000456830 416 ntBASIC3□□□□□ -1.93
GABPAQ06546 HMGN2P13-201ENST00000476476 274 ntBASIC3□□□□□ -1.93
GABPAQ06546 AC004263.1-201ENST00000479327 332 ntBASIC3□□□□□ -1.93
GABPAQ06546 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3□□□□□ -1.93
GABPAQ06546 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3□□□□□ -1.93
GABPAQ06546 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3□□□□□ -1.93
GABPAQ06546 AC091544.4-201ENST00000555268 342 ntBASIC3□□□□□ -1.93
GABPAQ06546 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3□□□□□ -1.93
GABPAQ06546 AC008751.2-201ENST00000597885 980 ntBASIC3□□□□□ -1.93
GABPAQ06546 AP000254.1-201ENST00000609934 520 ntBASIC3□□□□□ -1.93
GABPAQ06546 AC013412.1-201ENST00000610687 192 ntBASIC3□□□□□ -1.93
GABPAQ06546 AC107871.2-201ENST00000612894 502 ntBASIC3□□□□□ -1.93
GABPAQ06546 AL603758.1-201ENST00000618654 241 ntBASIC3□□□□□ -1.93
GABPAQ06546 AC091304.6-201ENST00000619761 202 ntBASIC3□□□□□ -1.93
GABPAQ06546 U4.3-201ENST00000621047 82 ntBASIC3□□□□□ -1.93
GABPAQ06546 AC112204.3-201ENST00000623822 332 ntBASIC3□□□□□ -1.93
GABPAQ06546 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3□□□□□ -1.93
GABPAQ06546 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3□□□□□ -1.93
GABPAQ06546 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3□□□□□ -1.93
GABPAQ06546 AC008568.2-201ENST00000623862 2313 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 AC090740.1-201ENST00000623193 2262 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
GABPAQ06546 RNU6-432P-201ENST00000384196 109 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 RNU6-769P-201ENST00000384407 104 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
GABPAQ06546 AC008850.1-201ENST00000427546 362 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 RPL7L1P10-201ENST00000427790 463 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.99□□□□□ -1.93
GABPAQ06546 MTND5P25-201ENST00000430499 799 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.99□□□□□ -1.93
GABPAQ06546 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.99□□□□□ -1.93
GABPAQ06546 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.99□□□□□ -1.93
GABPAQ06546 EEF1B2P7-201ENST00000451177 676 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.99□□□□□ -1.93
GABPAQ06546 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.99□□□□□ -1.93
GABPAQ06546 AC135721.1-201ENST00000497954 479 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
GABPAQ06546 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.99□□□□□ -1.93
GABPAQ06546 RNU6-840P-201ENST00000517275 65 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.99□□□□□ -1.93
GABPAQ06546 MTATP6P15-201ENST00000527233 835 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 AP001646.1-201ENST00000527936 915 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
GABPAQ06546 AC002400.1-201ENST00000569310 726 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 MTCO3P24-201ENST00000572729 782 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 MIR4506-201ENST00000584693 77 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 UBE2L4-201ENST00000587688 464 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.99□□□□□ -1.93
GABPAQ06546 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
GABPAQ06546 Z99289.3-201ENST00000605586 594 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 AL158801.5-201ENST00000623123 465 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 AC092192.1-201ENST00000633154 1018 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.99□□□□□ -1.93
GABPAQ06546 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.99□□□□□ -1.93
GABPAQ06546 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
GABPAQ06546 DDX10P1-201ENST00000448545 1933 ntBASIC2.99□□□□□ -1.93
GABPAQ06546 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
GABPAQ06546 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
GABPAQ06546 MTND5P33-201ENST00000571250 1450 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 SNORA23-201ENST00000365128 182 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 RNU6-754P-201ENST00000391166 107 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 MIR1290-201ENST00000408735 78 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.98□□□□□ -1.93
GABPAQ06546 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.98□□□□□ -1.93
GABPAQ06546 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.98□□□□□ -1.93
GABPAQ06546 RPL7P46-201ENST00000425129 740 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.98□□□□□ -1.93
GABPAQ06546 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.98□□□□□ -1.93
GABPAQ06546 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.98□□□□□ -1.93
GABPAQ06546 RNA5SP385-201ENST00000515947 110 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 RNU6-1129P-201ENST00000515964 104 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 AC011260.1-201ENST00000578420 472 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 AC010620.2-201ENST00000600135 313 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 AC007621.1-201ENST00000604544 437 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 BCRP9-201ENST00000605312 388 ntBASIC2.98□□□□□ -1.93
GABPAQ06546 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.98□□□□□ -1.93
GABPAQ06546 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
GABPAQ06546 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.98□□□□□ -1.93
GABPAQ06546 OR4G2P-202ENST00000641004 1759 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.97□□□□□ -1.93
GABPAQ06546 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
GABPAQ06546 RNA5SP289-201ENST00000362332 137 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 SNORA36C-201ENST00000384289 132 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms