Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A3Q01955 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A3Q01955 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A3Q01955 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A3Q01955 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A3Q01955 Y_RNA.112-201ENST00000363250 102 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 RNU6-511P-201ENST00000363496 107 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 MIR568-201ENST00000385036 95 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 GNG5P5-201ENST00000420444 220 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AL391219.1-201ENST00000422570 483 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AL591419.1-201ENST00000427423 339 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 RPL30P15-201ENST00000457129 321 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3Q01955 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A3Q01955 RPL7P43-201ENST00000478876 753 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A3Q01955 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A3Q01955 RPL30P11-201ENST00000495304 339 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 RPS27P27-201ENST00000498779 255 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC098591.2-201ENST00000510152 315 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A3Q01955 RNA5SP454-201ENST00000517231 127 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3Q01955 RANP9-201ENST00000519957 271 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3Q01955 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3Q01955 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3Q01955 VN1R107P-201ENST00000601784 209 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 BDH2P1-201ENST00000602288 736 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC022893.3-201ENST00000607665 437 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 MIR8058-201ENST00000615737 89 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A3Q01955 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A3Q01955 MTND4P1-201ENST00000457501 1466 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A3Q01955 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A3Q01955 AL606537.1-201ENST00000607258 2011 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
COL4A3Q01955 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
COL4A3Q01955 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A3Q01955 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A3Q01955 RNU6-179P-201ENST00000363350 107 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COL4A3Q01955 AL121834.1-202ENST00000404494 277 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 EZH2P1-201ENST00000431167 291 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3Q01955 RPS3AP46-201ENST00000448352 682 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC243772.1-201ENST00000451620 410 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 ELOCP24-201ENST00000456370 334 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AL135752.1-201ENST00000479477 471 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A3Q01955 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3Q01955 MTCYBP40-201ENST00000509390 1135 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 PTP4A1P4-201ENST00000512479 322 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 RNU6-794P-201ENST00000517261 64 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A3Q01955 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.94□□□□□ -1.78
COL4A3Q01955 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3Q01955 MIR4790-201ENST00000577799 79 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 MIR3149-201ENST00000584629 83 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC113194.1-201ENST00000606037 500 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AL157817.1-201ENST00000614264 790 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC087588.2-201ENST00000617667 426 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AL713922.2-201ENST00000619384 716 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC074140.1-201ENST00000621617 208 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A3Q01955 AL773545.4-201ENST00000637262 310 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AL596275.2-204ENST00000641628 552 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AL513478.4-201ENST00000641636 310 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 AL596275.2-206ENST00000641957 626 ntBASIC3.94□□□□□ -1.78
COL4A3Q01955 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A3Q01955 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC3.93□□□□□ -1.78
COL4A3Q01955 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A3Q01955 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
COL4A3Q01955 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
COL4A3Q01955 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COL4A3Q01955 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A3Q01955 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
COL4A3Q01955 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A3Q01955 RNU6-1287P-201ENST00000362914 107 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 RNU6-1252P-201ENST00000363054 104 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 Y_RNA.167-201ENST00000363735 109 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 RNU5E-6P-201ENST00000365574 115 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 AC117470.1-201ENST00000381974 330 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 RNU6-301P-201ENST00000384277 107 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 Y_RNA.482-201ENST00000384377 111 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 RNU6-1060P-201ENST00000384664 107 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 RPS12P24-201ENST00000412619 387 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.93□□□□□ -1.78
COL4A3Q01955 AL139396.1-201ENST00000421137 167 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.93□□□□□ -1.78
COL4A3Q01955 AC105402.2-201ENST00000438503 358 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 AC020550.1-201ENST00000447385 163 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 FTH1P24-201ENST00000503502 462 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 RAC1P2-201ENST00000511164 579 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 AP003122.3-201ENST00000526316 255 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 GNRHR2P1-201ENST00000555315 631 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 MIR5187-201ENST00000583479 76 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 NF1P5-201ENST00000588287 448 ntBASIC3.93□□□□□ -1.78
COL4A3Q01955 AF038458.1-201ENST00000588406 262 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms