Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 HMGB1P5-201ENST00000255320 642 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 MIR520E-201ENST00000384867 87 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.44□□□□□ -2.18
SCN7AQ01118 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.44□□□□□ -2.18
SCN7AQ01118 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN7AQ01118 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.44□□□□□ -2.18
SCN7AQ01118 AC005297.2-201ENST00000450430 606 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 AC114322.1-201ENST00000506771 926 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.44□□□□□ -2.18
SCN7AQ01118 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.44□□□□□ -2.18
SCN7AQ01118 DUXAP5-201ENST00000529668 529 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 AC118942.1-201ENST00000529674 1035 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 AP000907.2-201ENST00000530827 353 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 AC135178.6-201ENST00000605314 398 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 AC126118.1-201ENST00000607744 628 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 AL355810.1-201ENST00000614629 552 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 AC021755.4-201ENST00000616620 456 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 AL449363.1-201ENST00000617815 186 ntBASIC1.44□□□□□ -2.18
SCN7AQ01118 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
SCN7AQ01118 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.43□□□□□ -2.18
SCN7AQ01118 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.43□□□□□ -2.18
SCN7AQ01118 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SCN7AQ01118 MIR524-201ENST00000385242 87 ntBASIC1.43□□□□□ -2.18
SCN7AQ01118 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
SCN7AQ01118 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.43□□□□□ -2.18
SCN7AQ01118 AL023807.1-201ENST00000407932 359 ntBASIC1.43□□□□□ -2.18
SCN7AQ01118 AL445687.1-201ENST00000439946 251 ntBASIC1.43□□□□□ -2.18
SCN7AQ01118 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.43□□□□□ -2.18
SCN7AQ01118 AC234775.1-201ENST00000454247 670 ntBASIC1.43□□□□□ -2.18
SCN7AQ01118 KLRA1P-201ENST00000503499 986 ntBASIC1.43□□□□□ -2.18
SCN7AQ01118 MTND2P26-201ENST00000528255 1029 ntBASIC1.43□□□□□ -2.18
SCN7AQ01118 AL161629.2-201ENST00000615347 275 ntBASIC1.43□□□□□ -2.18
SCN7AQ01118 AL162373.1-201ENST00000620433 407 ntBASIC1.43□□□□□ -2.18
SCN7AQ01118 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SCN7AQ01118 RNU1-148P-201ENST00000384472 162 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 RNU6-1072P-201ENST00000384703 107 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 RNU6-443P-201ENST00000384780 107 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 AC007560.1-201ENST00000426912 237 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 RPL30P12-201ENST00000474666 353 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.42□□□□□ -2.18
SCN7AQ01118 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.42□□□□□ -2.18
SCN7AQ01118 AP004371.1-201ENST00000525240 214 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 AC025918.2-201ENST00000558683 763 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.42□□□□□ -2.18
SCN7AQ01118 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.42□□□□□ -2.18
SCN7AQ01118 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.42□□□□□ -2.18
SCN7AQ01118 UBE2D3P2-201ENST00000424409 445 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 MTND1P18-201ENST00000448191 573 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.42□□□□□ -2.18
SCN7AQ01118 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.42□□□□□ -2.18
SCN7AQ01118 AC123912.5-201ENST00000605470 343 ntBASIC1.42□□□□□ -2.18
SCN7AQ01118 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.42□□□□□ -2.18
SCN7AQ01118 RNU4-41P-201ENST00000364426 143 ntBASIC1.41□□□□□ -2.18
SCN7AQ01118 MIR17-201ENST00000385012 84 ntBASIC1.41□□□□□ -2.18
SCN7AQ01118 MTCYBP24-201ENST00000420387 1106 ntBASIC1.41□□□□□ -2.18
SCN7AQ01118 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.41□□□□□ -2.18
SCN7AQ01118 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SCN7AQ01118 SDCBPP1-201ENST00000440192 890 ntBASIC1.41□□□□□ -2.18
SCN7AQ01118 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SCN7AQ01118 AC108120.2-201ENST00000512973 294 ntBASIC1.41□□□□□ -2.18
SCN7AQ01118 HMGB1P46-201ENST00000520062 610 ntBASIC1.41□□□□□ -2.18
SCN7AQ01118 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.41□□□□□ -2.18
SCN7AQ01118 AC012213.4-201ENST00000606457 354 ntBASIC1.41□□□□□ -2.18
SCN7AQ01118 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.41□□□□□ -2.18
SCN7AQ01118 AL390862.1-201ENST00000635467 1469 ntBASIC1.41□□□□□ -2.18
SCN7AQ01118 AC080100.1-201ENST00000624239 5356 ntBASIC1.41□□□□□ -2.18
SCN7AQ01118 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SCN7AQ01118 AC009812.4-201ENST00000569134 1805 ntBASIC1.4□□□□□ -2.18
SCN7AQ01118 RNA5SP391-201ENST00000363456 119 ntBASIC1.4□□□□□ -2.19
SCN7AQ01118 SNORA46.1-201ENST00000391069 153 ntBASIC1.4□□□□□ -2.19
SCN7AQ01118 POLR2J4-204ENST00000418424 324 ntBASIC1.4□□□□□ -2.19
SCN7AQ01118 UBE2V1P6-201ENST00000430840 422 ntBASIC1.4□□□□□ -2.19
SCN7AQ01118 RFC5P1-201ENST00000454419 874 ntBASIC1.4□□□□□ -2.19
SCN7AQ01118 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.4□□□□□ -2.19
SCN7AQ01118 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.4□□□□□ -2.19
SCN7AQ01118 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.4□□□□□ -2.19
SCN7AQ01118 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.4□□□□□ -2.19
SCN7AQ01118 AC083923.1-201ENST00000523708 376 ntBASIC1.4□□□□□ -2.19
SCN7AQ01118 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.4□□□□□ -2.19
SCN7AQ01118 AC105036.1-201ENST00000566222 271 ntBASIC1.4□□□□□ -2.19
SCN7AQ01118 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SCN7AQ01118 SNORD23.1-201ENST00000408212 104 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN7AQ01118 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN7AQ01118 AC006548.1-201ENST00000427470 102 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 MTCYBP12-201ENST00000440559 1134 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SCN7AQ01118 AC025768.1-201ENST00000510057 267 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 CASP1P1-201ENST00000526345 212 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 AC005730.3-201ENST00000583067 366 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 CR381572.1-201ENST00000625098 102 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.39□□□□□ -2.19
SCN7AQ01118 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SCN7AQ01118 RNU1-133P-201ENST00000364867 167 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 SNORA18.2-201ENST00000383865 132 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 RNU6-193P-201ENST00000410977 107 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SCN7AQ01118 AL627224.1-201ENST00000448334 444 ntBASIC1.39□□□□□ -2.19
SCN7AQ01118 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms