Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RPS3AP61247 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RPS3AP61247 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPS3AP61247 MTND5P29-201ENST00000458676 1807 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 UBE2L2-201ENST00000254302 429 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 RNU6-169P-201ENST00000365336 107 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 RNU6-39P-201ENST00000384344 107 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 RNU1-101P-201ENST00000391171 127 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 BTF3L4P1-201ENST00000413813 468 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 PIGFP2-201ENST00000421400 651 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 ELOCP14-201ENST00000428070 331 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 MED13P1-201ENST00000428342 171 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 RPL36AP6-201ENST00000435770 321 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPS3AP61247 ELOCP7-201ENST00000439968 331 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.33□□□□□ -1.88
RPS3AP61247 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.33□□□□□ -1.88
RPS3AP61247 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.33□□□□□ -1.88
RPS3AP61247 RPL7P5-201ENST00000471472 736 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.33□□□□□ -1.88
RPS3AP61247 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.33□□□□□ -1.88
RPS3AP61247 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.33□□□□□ -1.88
RPS3AP61247 RNU1-95P-201ENST00000516357 160 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 RNU1-128P-201ENST00000516704 160 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.33□□□□□ -1.88
RPS3AP61247 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.33□□□□□ -1.88
RPS3AP61247 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.33□□□□□ -1.88
RPS3AP61247 AC012213.3-201ENST00000577199 777 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.33□□□□□ -1.88
RPS3AP61247 MIR3158-1-201ENST00000583596 81 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 AL121772.2-201ENST00000614331 297 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPS3AP61247 AC006133.1-201ENST00000617106 264 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.33□□□□□ -1.88
RPS3AP61247 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RPS3AP61247 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPS3AP61247 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RPS3AP61247 AL021368.2-201ENST00000606125 5352 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RPS3AP61247 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPS3AP61247 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 AC093010.3-201ENST00000570269 15214 ntBASIC3.33□□□□□ -1.88
RPS3AP61247 AC010680.1-201ENST00000590024 3590 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 OR5J1P-201ENST00000313544 939 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 FTLP6-201ENST00000355274 422 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPS3AP61247 RNU6-188P-201ENST00000364207 107 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 DYNLT3P1-201ENST00000378574 347 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 RNU6-946P-201ENST00000383878 107 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 U8.11-201ENST00000384699 133 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 U8.12-201ENST00000384701 133 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.32□□□□□ -1.88
RPS3AP61247 BX295541.1-201ENST00000417774 250 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AC099548.1-201ENST00000421443 426 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.32□□□□□ -1.88
RPS3AP61247 RPL31P35-201ENST00000431058 377 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 MTCO3P5-201ENST00000433620 714 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.32□□□□□ -1.88
RPS3AP61247 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.32□□□□□ -1.88
RPS3AP61247 AL031183.1-201ENST00000457667 207 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AC092798.1-201ENST00000458542 409 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 SNORD105B-201ENST00000458770 79 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 snoU13.28-201ENST00000459235 104 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 U8.18-201ENST00000459285 133 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 RN7SL283P-201ENST00000489055 303 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AC007182.2-201ENST00000489251 402 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.32□□□□□ -1.88
RPS3AP61247 AC138853.1-201ENST00000503549 823 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPS3AP61247 MTCO3P28-201ENST00000513351 515 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 APOOP4-201ENST00000513530 597 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 RNA5SP471-201ENST00000516971 106 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 MTCO2P4-201ENST00000517968 247 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPS3AP61247 AP003072.2-201ENST00000527756 676 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.32□□□□□ -1.88
RPS3AP61247 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.32□□□□□ -1.88
RPS3AP61247 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.32□□□□□ -1.88
RPS3AP61247 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.32□□□□□ -1.88
RPS3AP61247 NCAPGP2-201ENST00000557911 754 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 MIR3913-1-201ENST00000577744 102 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AC068790.2-201ENST00000602601 557 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.32□□□□□ -1.88
RPS3AP61247 MIR98-201ENST00000606724 119 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 FTX_3.1-201ENST00000610451 147 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AC092656.1-203ENST00000624134 423 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 ZNF285B-201ENST00000561698 1767 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 AL359693.1-201ENST00000614959 2407 ntBASIC3.32□□□□□ -1.88
RPS3AP61247 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.32□□□□□ -1.88
RPS3AP61247 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RPS3AP61247 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPS3AP61247 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RPS3AP61247 GABRG2-229ENST00000641017 3628 ntBASIC3.31□□□□□ -1.88
RPS3AP61247 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPS3AP61247 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPS3AP61247 Y_RNA.359-201ENST00000365498 102 ntBASIC3.31□□□□□ -1.88
RPS3AP61247 RNU6-198P-201ENST00000384258 104 ntBASIC3.31□□□□□ -1.88
RPS3AP61247 SNORA48.8-201ENST00000391324 134 ntBASIC3.31□□□□□ -1.88
RPS3AP61247 DEFB108C-201ENST00000400154 252 ntBASIC3.31□□□□□ -1.88
RPS3AP61247 AL354719.1-201ENST00000406535 843 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms