Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 RNU2-17P-201ENST00000410290 190 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 RN7SKP51-201ENST00000410781 304 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 VN1R51P-201ENST00000411675 945 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 RPS24P7-201ENST00000416921 246 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.32□□□□□ -2.2
CKS1BP61024 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.32□□□□□ -2.2
CKS1BP61024 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.32□□□□□ -2.2
CKS1BP61024 AC007742.1-201ENST00000425789 329 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 AC006946.1-201ENST00000429106 328 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 ELOCP26-201ENST00000436067 329 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.32□□□□□ -2.2
CKS1BP61024 USP9YP8-201ENST00000441913 500 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.32□□□□□ -2.2
CKS1BP61024 RPL26P9-201ENST00000457466 433 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.32□□□□□ -2.2
CKS1BP61024 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.32□□□□□ -2.2
CKS1BP61024 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.32□□□□□ -2.2
CKS1BP61024 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.32□□□□□ -2.2
CKS1BP61024 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.32□□□□□ -2.2
CKS1BP61024 AC107953.1-201ENST00000522216 297 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 AP001317.1-201ENST00000531194 960 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 CR383656.7-201ENST00000548164 174 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.32□□□□□ -2.2
CKS1BP61024 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.32□□□□□ -2.2
CKS1BP61024 AL031176.1-201ENST00000604554 466 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 AP000238.1-201ENST00000608759 426 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.32□□□□□ -2.2
CKS1BP61024 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
CKS1BP61024 GDI2P1-201ENST00000429312 1336 ntBASIC1.32□□□□□ -2.2
CKS1BP61024 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.32□□□□□ -2.2
CKS1BP61024 MIR7-1-201ENST00000384871 110 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 MIR514A1-201ENST00000385133 98 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CKS1BP61024 RNU2-15P-201ENST00000410692 191 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS1BP61024 AC009963.1-201ENST00000417265 157 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.31□□□□□ -2.2
CKS1BP61024 AL356320.1-201ENST00000429616 163 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 MED14P1-201ENST00000430517 648 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS1BP61024 AL512661.1-201ENST00000434586 1253 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 THAP5P1-201ENST00000439089 262 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.31□□□□□ -2.2
CKS1BP61024 CBWD4P-201ENST00000445695 655 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.31□□□□□ -2.2
CKS1BP61024 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS1BP61024 HMGB1P35-201ENST00000503360 598 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.31□□□□□ -2.2
CKS1BP61024 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS1BP61024 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS1BP61024 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.31□□□□□ -2.2
CKS1BP61024 AC022254.1-201ENST00000567857 235 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS1BP61024 SNORD39.3-201ENST00000584451 71 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 AL031274.2-201ENST00000599419 203 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 AL391813.1-201ENST00000603098 260 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 MTND4LP5-201ENST00000605152 292 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 AL160281.1-201ENST00000605307 311 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 Y_RNA.783-201ENST00000613546 102 ntBASIC1.31□□□□□ -2.2
CKS1BP61024 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.3□□□□□ -2.2
CKS1BP61024 RNA5SP289-201ENST00000362332 137 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 RNU6-741P-201ENST00000383889 107 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CKS1BP61024 SNORA40.19-201ENST00000390846 128 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 RNA5SP212-201ENST00000391223 107 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 AL121978.1-201ENST00000402778 359 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 AC009238.1-201ENST00000442165 424 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 AC009237.6-201ENST00000446969 424 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 AL096803.2-201ENST00000450032 677 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 MTCO3P11-201ENST00000455103 774 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CKS1BP61024 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.3□□□□□ -2.2
CKS1BP61024 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.3□□□□□ -2.2
CKS1BP61024 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.3□□□□□ -2.2
CKS1BP61024 AL354943.1-201ENST00000572103 781 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 AC007151.1-201ENST00000572774 483 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.3□□□□□ -2.2
CKS1BP61024 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.3□□□□□ -2.2
CKS1BP61024 AL671309.1-201ENST00000603750 544 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 AL138963.2-201ENST00000605137 226 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 AC103810.8-201ENST00000607347 118 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 AL138478.1-201ENST00000612252 832 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 MIR6130-201ENST00000619419 109 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 AC024581.2-201ENST00000619986 252 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.3□□□□□ -2.2
CKS1BP61024 AC006020.1-201ENST00000420179 1854 ntBASIC1.3□□□□□ -2.2
CKS1BP61024 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.3□□□□□ -2.2
CKS1BP61024 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CKS1BP61024 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.3□□□□□ -2.2
CKS1BP61024 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CKS1BP61024 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.29□□□□□ -2.2
CKS1BP61024 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CKS1BP61024 U3.12-201ENST00000364498 214 ntBASIC1.29□□□□□ -2.2
CKS1BP61024 SNORA70.4-201ENST00000365509 134 ntBASIC1.29□□□□□ -2.2
CKS1BP61024 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
CKS1BP61024 MIR888-201ENST00000401186 77 ntBASIC1.29□□□□□ -2.2
CKS1BP61024 SNORA11.1-201ENST00000408133 129 ntBASIC1.29□□□□□ -2.2
CKS1BP61024 RNU2-63P-201ENST00000410792 194 ntBASIC1.29□□□□□ -2.2
CKS1BP61024 ZNF863P-201ENST00000426746 417 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms