Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 NRON-201ENST00000517270 370 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN12P56749 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CLDN12P56749 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN12P56749 AL138976.2-201ENST00000563989 694 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 AC234778.2-201ENST00000566241 354 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN12P56749 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN12P56749 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN12P56749 AL391813.1-201ENST00000603098 260 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 AL160281.1-201ENST00000605307 311 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 AP001486.3-201ENST00000615334 372 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 U4atac.1-201ENST00000618345 95 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 AL603758.1-201ENST00000618654 241 ntBASIC1.86□□□□□ -2.11
CLDN12P56749 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.86□□□□□ -2.11
CLDN12P56749 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.85□□□□□ -2.11
CLDN12P56749 AC110491.1-201ENST00000562191 2010 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 RNU6-884P-201ENST00000363889 107 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 SNORA80A-201ENST00000363922 136 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 RNU6-359P-201ENST00000365466 108 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLDN12P56749 U6atac.2-201ENST00000408644 118 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 RNU2-40P-201ENST00000410833 196 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.85□□□□□ -2.11
CLDN12P56749 NUP35P1-201ENST00000422734 947 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.85□□□□□ -2.11
CLDN12P56749 UBE2FP3-201ENST00000436366 524 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.85□□□□□ -2.11
CLDN12P56749 KLF3P2-201ENST00000465138 268 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 DYNLL1P5-201ENST00000467158 270 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 AC026801.1-201ENST00000497178 464 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.85□□□□□ -2.11
CLDN12P56749 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.85□□□□□ -2.11
CLDN12P56749 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.85□□□□□ -2.11
CLDN12P56749 AC118465.1-201ENST00000513820 1271 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 RNU7-193P-201ENST00000516723 65 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 snoZ278.1-201ENST00000517059 112 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.85□□□□□ -2.11
CLDN12P56749 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.85□□□□□ -2.11
CLDN12P56749 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.85□□□□□ -2.11
CLDN12P56749 MIR3199-1-201ENST00000582434 88 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.85□□□□□ -2.11
CLDN12P56749 MTND4LP5-201ENST00000605152 292 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 AL021997.1-201ENST00000605757 193 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 AC069294.1-201ENST00000608397 350 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CLDN12P56749 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.85□□□□□ -2.11
CLDN12P56749 AC109454.4-201ENST00000623411 649 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 AC093591.3-201ENST00000634516 308 ntBASIC1.85□□□□□ -2.11
CLDN12P56749 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLDN12P56749 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLDN12P56749 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
CLDN12P56749 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.84□□□□□ -2.11
CLDN12P56749 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.84□□□□□ -2.11
CLDN12P56749 HSPA8P4-201ENST00000511877 1920 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 RNU6-28P-201ENST00000362378 107 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AL445529.1-201ENST00000398713 389 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 RNA5SP184-201ENST00000411071 108 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.84□□□□□ -2.11
CLDN12P56749 PTP4A1P7-201ENST00000423476 514 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 RSL24D1P8-201ENST00000434442 492 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CLDN12P56749 PSPHP1-201ENST00000450062 261 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AL118520.1-201ENST00000450770 291 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.84□□□□□ -2.11
CLDN12P56749 ATG12P2-201ENST00000456830 416 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC072039.1-201ENST00000477611 581 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC022493.1-201ENST00000492984 337 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.84□□□□□ -2.11
CLDN12P56749 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CLDN12P56749 AC008413.1-201ENST00000511864 177 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 RNU4-29P-201ENST00000515943 174 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 RNA5SP356-201ENST00000515972 94 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 RNA5SP281-201ENST00000516504 135 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 MIR514B-201ENST00000516774 80 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 SNORD19.2-201ENST00000516978 73 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.84□□□□□ -2.11
CLDN12P56749 AL133241.1-201ENST00000556832 487 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC079148.1-201ENST00000565944 819 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC106782.4-201ENST00000568264 210 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.84□□□□□ -2.11
CLDN12P56749 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.84□□□□□ -2.11
CLDN12P56749 AC090330.1-201ENST00000588646 764 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC008121.1-201ENST00000603244 268 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AL121917.1-203ENST00000605534 577 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.84□□□□□ -2.11
CLDN12P56749 AC084824.4-201ENST00000620106 731 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC098657.3-201ENST00000620434 263 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AL031601.2-202ENST00000622650 282 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 AC025048.6-202ENST00000627667 438 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.84□□□□□ -2.11
CLDN12P56749 ELF2P3-201ENST00000445099 1506 ntBASIC1.84□□□□□ -2.11
CLDN12P56749 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
CLDN12P56749 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
CLDN12P56749 RNU6-525P-201ENST00000363685 104 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms