Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.44□□□□□ -2.02
CDH6P55285 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CDH6P55285 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH6P55285 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH6P55285 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CDH6P55285 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CDH6P55285 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH6P55285 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDH6P55285 RN7SKP226-201ENST00000364912 300 ntBASIC2.43□□□□□ -2.02
CDH6P55285 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH6P55285 RNU6-140P-201ENST00000384566 108 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AL356421.1-201ENST00000403255 413 ntBASIC2.43□□□□□ -2.02
CDH6P55285 RN7SKP140-201ENST00000411196 284 ntBASIC2.43□□□□□ -2.02
CDH6P55285 RNU6-516P-201ENST00000411381 104 ntBASIC2.43□□□□□ -2.02
CDH6P55285 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDH6P55285 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.43□□□□□ -2.02
CDH6P55285 Z82209.1-201ENST00000422141 2135 ntBASIC2.43□□□□□ -2.02
CDH6P55285 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.43□□□□□ -2.02
CDH6P55285 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.43□□□□□ -2.02
CDH6P55285 AL445687.1-201ENST00000439946 251 ntBASIC2.43□□□□□ -2.02
CDH6P55285 OR10R1P-201ENST00000441524 1141 ntBASIC2.43□□□□□ -2.02
CDH6P55285 RPL23AP76-201ENST00000441860 458 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH6P55285 DPPA3P1-201ENST00000448050 469 ntBASIC2.43□□□□□ -2.02
CDH6P55285 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.43□□□□□ -2.02
CDH6P55285 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDH6P55285 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH6P55285 HMGB3P3-201ENST00000510526 400 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AC008837.2-201ENST00000513076 418 ntBASIC2.43□□□□□ -2.02
CDH6P55285 RNU6-150P-201ENST00000516237 95 ntBASIC2.43□□□□□ -2.02
CDH6P55285 RNA5SP82-201ENST00000516707 92 ntBASIC2.43□□□□□ -2.02
CDH6P55285 SNORA31.18-201ENST00000517043 134 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.43□□□□□ -2.02
CDH6P55285 AC109329.2-201ENST00000519658 482 ntBASIC2.43□□□□□ -2.02
CDH6P55285 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH6P55285 AC118942.1-201ENST00000529674 1035 ntBASIC2.43□□□□□ -2.02
CDH6P55285 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH6P55285 CYCSP2-201ENST00000558168 301 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AC009097.3-201ENST00000563557 1018 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH6P55285 MIR3117-201ENST00000584034 78 ntBASIC2.43□□□□□ -2.02
CDH6P55285 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
CDH6P55285 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
CDH6P55285 TPMTP1-201ENST00000592307 737 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AC002545.1-201ENST00000592511 181 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AC046143.2-201ENST00000609789 160 ntBASIC2.43□□□□□ -2.02
CDH6P55285 FTX_3.1-201ENST00000610451 147 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AC011890.2-201ENST00000613393 294 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AC019226.1-201ENST00000625666 515 ntBASIC2.43□□□□□ -2.02
CDH6P55285 AC243829.7-201ENST00000633081 225 ntBASIC2.43□□□□□ -2.02
CDH6P55285 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.43□□□□□ -2.02
CDH6P55285 ZNF658B-202ENST00000615961 3375 ntBASIC2.43□□□□□ -2.02
CDH6P55285 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH6P55285 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH6P55285 ZNF271P-202ENST00000465539 1970 ntBASIC2.43□□□□□ -2.02
CDH6P55285 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CDH6P55285 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDH6P55285 AL139276.1-201ENST00000311910 1001 ntBASIC2.42□□□□□ -2.02
CDH6P55285 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH6P55285 RNU6-114P-201ENST00000384704 105 ntBASIC2.42□□□□□ -2.02
CDH6P55285 RNU6-1000P-201ENST00000391066 106 ntBASIC2.42□□□□□ -2.02
CDH6P55285 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH6P55285 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH6P55285 AL513331.1-201ENST00000411908 397 ntBASIC2.42□□□□□ -2.02
CDH6P55285 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.42□□□□□ -2.02
CDH6P55285 HMGB1P49-201ENST00000418882 569 ntBASIC2.42□□□□□ -2.02
CDH6P55285 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.42□□□□□ -2.02
CDH6P55285 RPS15AP28-201ENST00000435088 386 ntBASIC2.42□□□□□ -2.02
CDH6P55285 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH6P55285 MTND1P31-201ENST00000449206 961 ntBASIC2.42□□□□□ -2.02
CDH6P55285 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH6P55285 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.42□□□□□ -2.02
CDH6P55285 AC010376.1-201ENST00000522101 334 ntBASIC2.42□□□□□ -2.02
CDH6P55285 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
CDH6P55285 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.42□□□□□ -2.02
CDH6P55285 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.42□□□□□ -2.02
CDH6P55285 AC105137.2-201ENST00000569073 466 ntBASIC2.42□□□□□ -2.02
CDH6P55285 MIR3616-201ENST00000584070 92 ntBASIC2.42□□□□□ -2.02
CDH6P55285 AC136601.2-201ENST00000604356 474 ntBASIC2.42□□□□□ -2.02
CDH6P55285 BNIP3P31-201ENST00000604515 566 ntBASIC2.42□□□□□ -2.02
CDH6P55285 AL138478.1-201ENST00000612252 832 ntBASIC2.42□□□□□ -2.02
CDH6P55285 AC010133.1-201ENST00000615809 842 ntBASIC2.42□□□□□ -2.02
CDH6P55285 AC025034.2-201ENST00000623264 286 ntBASIC2.42□□□□□ -2.02
CDH6P55285 AL138960.2-201ENST00000625145 535 ntBASIC2.42□□□□□ -2.02
CDH6P55285 AL137003.2-201ENST00000606924 2538 ntBASIC2.42□□□□□ -2.02
CDH6P55285 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CDH6P55285 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.42□□□□□ -2.02
CDH6P55285 AC011477.1-204ENST00000623416 1325 ntBASIC2.42□□□□□ -2.02
CDH6P55285 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDH6P55285 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDH6P55285 AC092447.10-201ENST00000620607 1652 ntBASIC2.41□□□□□ -2.02
CDH6P55285 Y_RNA.111-201ENST00000363248 100 ntBASIC2.41□□□□□ -2.02
CDH6P55285 RNU6-560P-201ENST00000364007 108 ntBASIC2.41□□□□□ -2.02
CDH6P55285 RNU1-39P-201ENST00000383897 165 ntBASIC2.41□□□□□ -2.02
CDH6P55285 Y_RNA.472-201ENST00000384322 102 ntBASIC2.41□□□□□ -2.02
CDH6P55285 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
CDH6P55285 MIR888-201ENST00000401186 77 ntBASIC2.41□□□□□ -2.02
CDH6P55285 AL590084.2-201ENST00000401481 382 ntBASIC2.41□□□□□ -2.02
CDH6P55285 TXNP7-201ENST00000406296 293 ntBASIC2.41□□□□□ -2.02
CDH6P55285 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms