Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.9□□□□□ -1.79
COPAP53621 SNORA31.8-201ENST00000516327 108 ntBASIC3.9□□□□□ -1.79
COPAP53621 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.9□□□□□ -1.79
COPAP53621 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.9□□□□□ -1.79
COPAP53621 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.9□□□□□ -1.79
COPAP53621 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.9□□□□□ -1.79
COPAP53621 AP000907.4-201ENST00000604143 237 ntBASIC3.9□□□□□ -1.79
COPAP53621 AP002360.4-201ENST00000606980 481 ntBASIC3.9□□□□□ -1.79
COPAP53621 AP001596.2-201ENST00000608410 312 ntBASIC3.9□□□□□ -1.79
COPAP53621 AC069200.1-201ENST00000609511 323 ntBASIC3.9□□□□□ -1.79
COPAP53621 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.9□□□□□ -1.79
COPAP53621 AC005609.4-201ENST00000625071 447 ntBASIC3.9□□□□□ -1.79
COPAP53621 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.9□□□□□ -1.79
COPAP53621 AL034408.1-202ENST00000636088 415 ntBASIC3.9□□□□□ -1.79
COPAP53621 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.9□□□□□ -1.79
COPAP53621 MIR1321-201ENST00000637766 79 ntBASIC3.9□□□□□ -1.79
COPAP53621 AC009093.8-201ENST00000641769 292 ntBASIC3.9□□□□□ -1.79
COPAP53621 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.9□□□□□ -1.79
COPAP53621 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COPAP53621 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
COPAP53621 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
COPAP53621 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
COPAP53621 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COPAP53621 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COPAP53621 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.89□□□□□ -1.79
COPAP53621 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.89□□□□□ -1.79
COPAP53621 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.89□□□□□ -1.79
COPAP53621 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COPAP53621 DEFB108F-201ENST00000344638 222 ntBASIC3.89□□□□□ -1.79
COPAP53621 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COPAP53621 RNU6-483P-201ENST00000384088 108 ntBASIC3.89□□□□□ -1.79
COPAP53621 MIR1-2-201ENST00000384961 85 ntBASIC3.89□□□□□ -1.79
COPAP53621 MIR199A2-201ENST00000385289 110 ntBASIC3.89□□□□□ -1.79
COPAP53621 RNU2-9P-201ENST00000410194 145 ntBASIC3.89□□□□□ -1.79
COPAP53621 AL353193.1-201ENST00000421444 268 ntBASIC3.89□□□□□ -1.79
COPAP53621 MED13P1-201ENST00000428342 171 ntBASIC3.89□□□□□ -1.79
COPAP53621 RPS20P5-201ENST00000434808 360 ntBASIC3.89□□□□□ -1.79
COPAP53621 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COPAP53621 RPL7P54-201ENST00000438336 674 ntBASIC3.89□□□□□ -1.79
COPAP53621 BNIP3P2-201ENST00000441221 577 ntBASIC3.89□□□□□ -1.79
COPAP53621 GAPDHP27-201ENST00000447427 1020 ntBASIC3.89□□□□□ -1.79
COPAP53621 WASF1P1-201ENST00000447560 1131 ntBASIC3.89□□□□□ -1.79
COPAP53621 HSPE1P6-201ENST00000479457 291 ntBASIC3.89□□□□□ -1.79
COPAP53621 AC026427.2-201ENST00000506228 536 ntBASIC3.89□□□□□ -1.79
COPAP53621 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.89□□□□□ -1.79
COPAP53621 RNU6-1281P-201ENST00000516223 105 ntBASIC3.89□□□□□ -1.79
COPAP53621 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.89□□□□□ -1.79
COPAP53621 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.89□□□□□ -1.79
COPAP53621 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.89□□□□□ -1.79
COPAP53621 AC025449.1-201ENST00000603896 529 ntBASIC3.89□□□□□ -1.79
COPAP53621 AC007621.1-201ENST00000604544 437 ntBASIC3.89□□□□□ -1.79
COPAP53621 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.89□□□□□ -1.79
COPAP53621 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.89□□□□□ -1.79
COPAP53621 U6.42-201ENST00000618440 107 ntBASIC3.89□□□□□ -1.79
COPAP53621 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
COPAP53621 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.89□□□□□ -1.79
COPAP53621 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COPAP53621 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
COPAP53621 RPS4XP5-202ENST00000449995 1334 ntBASIC3.89□□□□□ -1.79
COPAP53621 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COPAP53621 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COPAP53621 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COPAP53621 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.88□□□□□ -1.79
COPAP53621 AC073343.1-201ENST00000328239 651 ntBASIC3.88□□□□□ -1.79
COPAP53621 SNORA63.1-201ENST00000362493 131 ntBASIC3.88□□□□□ -1.79
COPAP53621 SNORD46.1-201ENST00000364139 104 ntBASIC3.88□□□□□ -1.79
COPAP53621 SNORA36C-201ENST00000384289 132 ntBASIC3.88□□□□□ -1.79
COPAP53621 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
COPAP53621 RPS4XP8-201ENST00000402039 771 ntBASIC3.88□□□□□ -1.79
COPAP53621 RNU2-39P-201ENST00000410604 198 ntBASIC3.88□□□□□ -1.79
COPAP53621 AC022028.1-201ENST00000412054 408 ntBASIC3.88□□□□□ -1.79
COPAP53621 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.88□□□□□ -1.79
COPAP53621 MRPL50P2-201ENST00000416821 482 ntBASIC3.88□□□□□ -1.79
COPAP53621 AC018630.2-202ENST00000422992 927 ntBASIC3.88□□□□□ -1.79
COPAP53621 RAC1P6-201ENST00000423911 575 ntBASIC3.88□□□□□ -1.79
COPAP53621 HMGB1P37-201ENST00000439613 609 ntBASIC3.88□□□□□ -1.79
COPAP53621 MTATP6P23-201ENST00000440153 476 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.88□□□□□ -1.79
COPAP53621 NFU1P2-201ENST00000448700 469 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.88□□□□□ -1.79
COPAP53621 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.88□□□□□ -1.79
COPAP53621 RN7SL432P-201ENST00000484057 298 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL049874.1-201ENST00000489560 388 ntBASIC3.88□□□□□ -1.79
COPAP53621 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.88□□□□□ -1.79
COPAP53621 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.88□□□□□ -1.79
COPAP53621 RNU6-1092P-201ENST00000516955 87 ntBASIC3.88□□□□□ -1.79
COPAP53621 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.88□□□□□ -1.79
COPAP53621 MTND1P35-201ENST00000526739 508 ntBASIC3.88□□□□□ -1.79
COPAP53621 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.88□□□□□ -1.79
COPAP53621 HMGB1P6-201ENST00000569046 646 ntBASIC3.88□□□□□ -1.79
COPAP53621 AC005951.2-201ENST00000576282 495 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL670379.6-201ENST00000603753 252 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL670379.11-201ENST00000604059 253 ntBASIC3.88□□□□□ -1.79
COPAP53621 AC008162.1-201ENST00000604718 254 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL670379.1-201ENST00000604752 252 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL670379.5-201ENST00000605253 252 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL670379.12-201ENST00000605291 253 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL670379.8-201ENST00000605353 252 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL670379.7-201ENST00000605823 252 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL121992.2-201ENST00000606262 256 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms