Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.73□□□□□ -1.97
HCFC1P51610 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.73□□□□□ -1.97
HCFC1P51610 ATP1B3P1-201ENST00000605365 821 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 HMGN2P28-201ENST00000606102 262 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.73□□□□□ -1.97
HCFC1P51610 AC002550.2-201ENST00000621246 394 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HCFC1P51610 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HCFC1P51610 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HCFC1P51610 AF127577.6-201ENST00000623352 2191 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HCFC1P51610 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.73□□□□□ -1.97
HCFC1P51610 AC092125.1-201ENST00000562568 1995 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.73□□□□□ -1.97
HCFC1P51610 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HCFC1P51610 Y_RNA.1-201ENST00000352915 104 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 RNY3P13-201ENST00000365542 102 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.73□□□□□ -1.97
HCFC1P51610 RNU6-339P-201ENST00000384310 107 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 RNU6-769P-201ENST00000384407 104 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 MIR558-201ENST00000384920 94 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 MIR181A1-201ENST00000385026 110 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AL583834.1-201ENST00000406943 343 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.73□□□□□ -1.97
HCFC1P51610 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.73□□□□□ -1.97
HCFC1P51610 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.73□□□□□ -1.97
HCFC1P51610 AC000111.3-201ENST00000433478 193 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 MTND1P1-201ENST00000445453 368 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.73□□□□□ -1.97
HCFC1P51610 MTND1P12-201ENST00000455231 147 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.73□□□□□ -1.97
HCFC1P51610 RPL23AP67-201ENST00000465341 474 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 MTCO3P38-201ENST00000468910 766 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 RPS4XP22-201ENST00000480755 780 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC055855.1-201ENST00000489563 579 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC079382.1-201ENST00000493346 557 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC096751.1-202ENST00000502691 1067 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.73□□□□□ -1.97
HCFC1P51610 RNU6-528P-201ENST00000516926 100 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 IGKV2D-36-201ENST00000518643 226 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.73□□□□□ -1.97
HCFC1P51610 OR5G4P-201ENST00000525251 760 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HCFC1P51610 AC015917.1-201ENST00000579654 510 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.73□□□□□ -1.97
HCFC1P51610 AL021997.1-201ENST00000605757 193 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC109347.2-201ENST00000610220 349 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 U4.5-201ENST00000617137 123 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC072046.2-201ENST00000618366 268 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC018755.4-201ENST00000619715 454 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.73□□□□□ -1.97
HCFC1P51610 AC007998.5-201ENST00000622938 237 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HCFC1P51610 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.72□□□□□ -1.97
HCFC1P51610 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HCFC1P51610 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HCFC1P51610 AC091152.2-201ENST00000591628 2569 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 ELF2P3-201ENST00000445099 1506 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AC007496.3-201ENST00000624987 3443 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 Y_RNA.46-201ENST00000362695 102 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 RNU5A-8P-201ENST00000364102 114 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 RNU6-283P-201ENST00000364788 107 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 MIR1-2-201ENST00000384961 85 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 RPL21P24-201ENST00000413752 448 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.72□□□□□ -1.97
HCFC1P51610 ELOCP4-201ENST00000420090 333 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.72□□□□□ -1.97
HCFC1P51610 AC137499.1-201ENST00000427602 88 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 GPR143P-201ENST00000434155 205 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 MTND1P9-201ENST00000453775 944 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.72□□□□□ -1.97
HCFC1P51610 AC112204.1-201ENST00000502591 103 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.72□□□□□ -1.97
HCFC1P51610 Y_RNA.672-201ENST00000516289 104 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AC009812.2-201ENST00000517657 457 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 MTND1P5-201ENST00000517906 940 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AP001893.2-201ENST00000526949 202 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AC123904.2-201ENST00000548059 300 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.72□□□□□ -1.97
HCFC1P51610 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.72□□□□□ -1.97
HCFC1P51610 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.72□□□□□ -1.97
HCFC1P51610 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.72□□□□□ -1.97
HCFC1P51610 MIR3162-201ENST00000581818 82 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.72□□□□□ -1.97
HCFC1P51610 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HCFC1P51610 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
HCFC1P51610 AL138713.1-201ENST00000624026 2130 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AC091925.2-201ENST00000625059 256 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AC073476.4-201ENST00000628409 72 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.72□□□□□ -1.97
HCFC1P51610 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HCFC1P51610 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.72□□□□□ -1.97
HCFC1P51610 AC009902.3-201ENST00000606235 2172 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
HCFC1P51610 AC244517.1-201ENST00000606030 2086 ntBASIC2.72□□□□□ -1.97
HCFC1P51610 AC073325.2-201ENST00000339545 159 ntBASIC2.71□□□□□ -1.98
HCFC1P51610 SNORD56.3-201ENST00000363507 71 ntBASIC2.71□□□□□ -1.98
HCFC1P51610 RNY4P34-201ENST00000364779 95 ntBASIC2.71□□□□□ -1.98
HCFC1P51610 MRPL42P2-201ENST00000403169 426 ntBASIC2.71□□□□□ -1.98
HCFC1P51610 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms