Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.48□□□□□ -1.37
PRIM1P49642 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC6.48□□□□□ -1.37
PRIM1P49642 MIR892C-201ENST00000516410 77 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.48□□□□□ -1.37
PRIM1P49642 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC6.48□□□□□ -1.37
PRIM1P49642 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PRIM1P49642 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.48□□□□□ -1.37
PRIM1P49642 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.48□□□□□ -1.37
PRIM1P49642 MIR4496-201ENST00000635896 61 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PRIM1P49642 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PRIM1P49642 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PRIM1P49642 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PRIM1P49642 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
PRIM1P49642 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
PRIM1P49642 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.47□□□□□ -1.37
PRIM1P49642 AL590240.1-201ENST00000334118 313 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 Y_RNA.44-201ENST00000362676 108 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 RNU4-90P-201ENST00000362773 141 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 MIR301A-201ENST00000385261 86 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 Y_RNA.626-201ENST00000411288 95 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 RPS11P1-201ENST00000451072 473 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 AL445433.1-201ENST00000457507 257 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 AC091153.1-201ENST00000466297 402 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 HMGN1P11-201ENST00000508668 303 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 RN7SKP21-201ENST00000516503 220 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 RNU6-143P-201ENST00000516942 93 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 AL110118.1-201ENST00000553543 400 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 AC104581.2-201ENST00000572227 430 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 MIR1254-2-201ENST00000579553 63 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 AL020997.2-201ENST00000602607 184 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC6.47□□□□□ -1.37
PRIM1P49642 AL450472.3-201ENST00000615578 367 ntBASIC6.47□□□□□ -1.37
PRIM1P49642 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.47□□□□□ -1.37
PRIM1P49642 AP005432.1-201ENST00000580891 3485 ntBASIC6.46□□□□□ -1.37
PRIM1P49642 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.46□□□□□ -1.37
PRIM1P49642 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PRIM1P49642 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
PRIM1P49642 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PRIM1P49642 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.46□□□□□ -1.37
PRIM1P49642 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.46□□□□□ -1.37
PRIM1P49642 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
PRIM1P49642 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PRIM1P49642 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PRIM1P49642 Y_RNA.8-201ENST00000362353 102 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 Y_RNA.143-201ENST00000363520 106 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.46□□□□□ -1.38
PRIM1P49642 SNORA70.10-201ENST00000384515 134 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 RNU6-1179P-201ENST00000384667 107 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 RNU6-493P-201ENST00000391321 108 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 RNU2-20P-201ENST00000410425 191 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 AC004975.1-201ENST00000428733 208 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 NUTF2P7-201ENST00000453086 375 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 PPIAP21-201ENST00000464473 501 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.46□□□□□ -1.38
PRIM1P49642 AL049830.2-201ENST00000480072 201 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 IGKV2D-36-201ENST00000518643 226 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 AP006245.1-201ENST00000522549 120 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 CASP1P1-201ENST00000526345 212 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC6.46□□□□□ -1.38
PRIM1P49642 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.46□□□□□ -1.38
PRIM1P49642 AC009318.2-201ENST00000610917 651 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC6.46□□□□□ -1.38
PRIM1P49642 AC010266.2-201ENST00000564741 3255 ntBASIC6.46□□□□□ -1.38
PRIM1P49642 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PRIM1P49642 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
PRIM1P49642 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PRIM1P49642 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
PRIM1P49642 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PRIM1P49642 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PRIM1P49642 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.45□□□□□ -1.38
PRIM1P49642 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PRIM1P49642 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PRIM1P49642 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PRIM1P49642 RNU6-858P-201ENST00000362436 107 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PRIM1P49642 RNU2-43P-201ENST00000410306 190 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 RNU2-51P-201ENST00000410708 197 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.45□□□□□ -1.38
PRIM1P49642 RPL17P36-201ENST00000420302 549 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 AC099336.2-201ENST00000422457 254 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 AC008065.1-201ENST00000428525 348 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.45□□□□□ -1.38
PRIM1P49642 AC099560.2-201ENST00000457554 255 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 RPL21P104-201ENST00000464143 478 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 RPL23AP2-201ENST00000471227 466 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 RNU6-1095P-201ENST00000516148 108 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 RN7SKP277-201ENST00000516895 283 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 AC134698.5-201ENST00000519444 336 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 IGHVII-53-1-201ENST00000519538 255 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.45□□□□□ -1.38
PRIM1P49642 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.45□□□□□ -1.38
PRIM1P49642 MIR4643-201ENST00000577473 78 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 AC009314.1-201ENST00000603871 304 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 AC073657.2-201ENST00000605661 303 ntBASIC6.45□□□□□ -1.38
PRIM1P49642 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
PRIM1P49642 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PRIM1P49642 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms