Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SDCBPP3-201ENST00000419629 891 ntBASIC3.42□□□□□ -1.86
CENPAP49450 RPL7P54-201ENST00000438336 674 ntBASIC3.42□□□□□ -1.86
CENPAP49450 HMGB3P12-201ENST00000438745 556 ntBASIC3.42□□□□□ -1.86
CENPAP49450 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.42□□□□□ -1.86
CENPAP49450 RPS15AP9-201ENST00000439856 381 ntBASIC3.42□□□□□ -1.86
CENPAP49450 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.42□□□□□ -1.86
CENPAP49450 AC006512.1-201ENST00000468816 291 ntBASIC3.42□□□□□ -1.86
CENPAP49450 RPL7P19-201ENST00000469948 618 ntBASIC3.42□□□□□ -1.86
CENPAP49450 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.42□□□□□ -1.86
CENPAP49450 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.42□□□□□ -1.86
CENPAP49450 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.42□□□□□ -1.86
CENPAP49450 AC117522.1-201ENST00000509821 380 ntBASIC3.42□□□□□ -1.86
CENPAP49450 RN7SKP83-201ENST00000516512 178 ntBASIC3.42□□□□□ -1.86
CENPAP49450 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.42□□□□□ -1.86
CENPAP49450 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.42□□□□□ -1.86
CENPAP49450 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.42□□□□□ -1.86
CENPAP49450 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.42□□□□□ -1.86
CENPAP49450 TRAV37-201ENST00000553906 342 ntBASIC3.42□□□□□ -1.86
CENPAP49450 AC037471.2-201ENST00000564941 598 ntBASIC3.42□□□□□ -1.86
CENPAP49450 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.42□□□□□ -1.86
CENPAP49450 AL591034.3-201ENST00000605511 685 ntBASIC3.42□□□□□ -1.86
CENPAP49450 MIR6867-201ENST00000610636 67 ntBASIC3.42□□□□□ -1.86
CENPAP49450 MIR6716-201ENST00000613413 80 ntBASIC3.42□□□□□ -1.86
CENPAP49450 AC083809.1-201ENST00000615051 472 ntBASIC3.42□□□□□ -1.86
CENPAP49450 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.42□□□□□ -1.86
CENPAP49450 MIR492-201ENST00000638676 116 ntBASIC3.42□□□□□ -1.86
CENPAP49450 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CENPAP49450 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.42□□□□□ -1.86
CENPAP49450 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.42□□□□□ -1.86
CENPAP49450 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CENPAP49450 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CENPAP49450 ZNF680P1-201ENST00000436625 1469 ntBASIC3.41□□□□□ -1.86
CENPAP49450 OR4G2P-202ENST00000641004 1759 ntBASIC3.41□□□□□ -1.86
CENPAP49450 Y_RNA.367-201ENST00000365544 101 ntBASIC3.41□□□□□ -1.86
CENPAP49450 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CENPAP49450 Y_RNA.481-201ENST00000384373 102 ntBASIC3.41□□□□□ -1.86
CENPAP49450 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.41□□□□□ -1.86
CENPAP49450 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.41□□□□□ -1.86
CENPAP49450 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CENPAP49450 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CENPAP49450 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.41□□□□□ -1.86
CENPAP49450 UBE2D3P2-201ENST00000424409 445 ntBASIC3.41□□□□□ -1.86
CENPAP49450 MTATP6P16-201ENST00000434543 526 ntBASIC3.41□□□□□ -1.86
CENPAP49450 SNRPEP4-201ENST00000435815 279 ntBASIC3.41□□□□□ -1.86
CENPAP49450 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.41□□□□□ -1.86
CENPAP49450 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.41□□□□□ -1.86
CENPAP49450 RPS20P20-201ENST00000460498 340 ntBASIC3.41□□□□□ -1.86
CENPAP49450 AC092989.1-201ENST00000481235 277 ntBASIC3.41□□□□□ -1.86
CENPAP49450 AC026979.1-201ENST00000492525 396 ntBASIC3.41□□□□□ -1.86
CENPAP49450 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.41□□□□□ -1.86
CENPAP49450 AC116562.3-201ENST00000506136 177 ntBASIC3.41□□□□□ -1.86
CENPAP49450 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.41□□□□□ -1.86
CENPAP49450 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.41□□□□□ -1.86
CENPAP49450 OR5AQ1P-201ENST00000527596 927 ntBASIC3.41□□□□□ -1.86
CENPAP49450 AC068587.5-201ENST00000528506 175 ntBASIC3.41□□□□□ -1.86
CENPAP49450 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CENPAP49450 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CENPAP49450 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CENPAP49450 AC025884.1-201ENST00000556034 378 ntBASIC3.41□□□□□ -1.86
CENPAP49450 NCAPGP2-201ENST00000557911 754 ntBASIC3.41□□□□□ -1.86
CENPAP49450 AC055876.1-202ENST00000567053 138 ntBASIC3.41□□□□□ -1.86
CENPAP49450 AC025678.1-201ENST00000567861 338 ntBASIC3.41□□□□□ -1.86
CENPAP49450 HMGB1P6-201ENST00000569046 646 ntBASIC3.41□□□□□ -1.86
CENPAP49450 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.41□□□□□ -1.86
CENPAP49450 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.41□□□□□ -1.86
CENPAP49450 DPPA3P3-201ENST00000603842 430 ntBASIC3.41□□□□□ -1.86
CENPAP49450 RBM11P1-201ENST00000604951 799 ntBASIC3.41□□□□□ -1.86
CENPAP49450 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.41□□□□□ -1.86
CENPAP49450 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.41□□□□□ -1.86
CENPAP49450 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CENPAP49450 API5P2-201ENST00000397055 1498 ntBASIC3.41□□□□□ -1.86
CENPAP49450 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CENPAP49450 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CENPAP49450 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
CENPAP49450 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CENPAP49450 RNU6-960P-201ENST00000364056 120 ntBASIC3.4□□□□□ -1.87
CENPAP49450 Y_RNA.402-201ENST00000383972 102 ntBASIC3.4□□□□□ -1.87
CENPAP49450 Y_RNA.450-201ENST00000384198 113 ntBASIC3.4□□□□□ -1.87
CENPAP49450 Y_RNA.453-201ENST00000384223 109 ntBASIC3.4□□□□□ -1.87
CENPAP49450 RN7SKP285-201ENST00000410137 318 ntBASIC3.4□□□□□ -1.87
CENPAP49450 RN7SKP140-201ENST00000411196 284 ntBASIC3.4□□□□□ -1.87
CENPAP49450 MRPL50P2-201ENST00000416821 482 ntBASIC3.4□□□□□ -1.87
CENPAP49450 AL356095.1-201ENST00000417217 199 ntBASIC3.4□□□□□ -1.87
CENPAP49450 USP9YP27-201ENST00000418455 438 ntBASIC3.4□□□□□ -1.87
CENPAP49450 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.4□□□□□ -1.87
CENPAP49450 AC006989.1-201ENST00000427212 131 ntBASIC3.4□□□□□ -1.87
CENPAP49450 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.4□□□□□ -1.87
CENPAP49450 AC114755.5-201ENST00000447760 831 ntBASIC3.4□□□□□ -1.87
CENPAP49450 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.4□□□□□ -1.87
CENPAP49450 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
CENPAP49450 AC126389.1-201ENST00000477436 290 ntBASIC3.4□□□□□ -1.87
CENPAP49450 AC068587.1-201ENST00000483613 781 ntBASIC3.4□□□□□ -1.87
CENPAP49450 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.4□□□□□ -1.87
CENPAP49450 HSPD1P15-201ENST00000505573 1122 ntBASIC3.4□□□□□ -1.87
CENPAP49450 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.4□□□□□ -1.87
CENPAP49450 RNA5SP208-201ENST00000516156 78 ntBASIC3.4□□□□□ -1.87
CENPAP49450 Y_RNA.693-201ENST00000516641 110 ntBASIC3.4□□□□□ -1.87
CENPAP49450 RN7SKP282-201ENST00000516824 299 ntBASIC3.4□□□□□ -1.87
CENPAP49450 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.4□□□□□ -1.87
CENPAP49450 AP001646.1-201ENST00000527936 915 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms