Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC34P49427 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
CDC34P49427 AL160314.1-201ENST00000490836 438 ntBASIC1.79□□□□□ -2.12
CDC34P49427 TMEM251P1-201ENST00000503717 318 ntBASIC1.79□□□□□ -2.12
CDC34P49427 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
CDC34P49427 SETP12-201ENST00000514068 805 ntBASIC1.79□□□□□ -2.12
CDC34P49427 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC34P49427 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC34P49427 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC34P49427 AC044913.1-201ENST00000557200 430 ntBASIC1.79□□□□□ -2.12
CDC34P49427 ANP32BP3-201ENST00000559213 706 ntBASIC1.79□□□□□ -2.12
CDC34P49427 AC106782.4-201ENST00000568264 210 ntBASIC1.79□□□□□ -2.12
CDC34P49427 MTATP6P25-201ENST00000574491 261 ntBASIC1.79□□□□□ -2.12
CDC34P49427 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC34P49427 AC124283.4-201ENST00000581815 456 ntBASIC1.79□□□□□ -2.12
CDC34P49427 AC090330.1-201ENST00000588646 764 ntBASIC1.79□□□□□ -2.12
CDC34P49427 AP001542.2-201ENST00000593141 364 ntBASIC1.79□□□□□ -2.12
CDC34P49427 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.79□□□□□ -2.12
CDC34P49427 AL138963.2-201ENST00000605137 226 ntBASIC1.79□□□□□ -2.12
CDC34P49427 AC100814.1-201ENST00000606963 623 ntBASIC1.79□□□□□ -2.12
CDC34P49427 MIR6810-201ENST00000622701 70 ntBASIC1.79□□□□□ -2.12
CDC34P49427 AL356473.1-201ENST00000406203 1408 ntBASIC1.79□□□□□ -2.12
CDC34P49427 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CDC34P49427 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDC34P49427 ZNF702P-202ENST00000434269 1966 ntBASIC1.78□□□□□ -2.12
CDC34P49427 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDC34P49427 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.78□□□□□ -2.12
CDC34P49427 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CDC34P49427 Y_RNA.625-201ENST00000411256 107 ntBASIC1.78□□□□□ -2.12
CDC34P49427 RPL26P27-201ENST00000414397 437 ntBASIC1.78□□□□□ -2.12
CDC34P49427 MTCYBP38-201ENST00000417160 1123 ntBASIC1.78□□□□□ -2.12
CDC34P49427 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.78□□□□□ -2.12
CDC34P49427 AL451054.2-201ENST00000420896 202 ntBASIC1.78□□□□□ -2.12
CDC34P49427 MTCO2P5-201ENST00000422621 426 ntBASIC1.78□□□□□ -2.12
CDC34P49427 ARL5AP4-201ENST00000430731 512 ntBASIC1.78□□□□□ -2.12
CDC34P49427 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.78□□□□□ -2.12
CDC34P49427 AC002381.1-201ENST00000447049 280 ntBASIC1.78□□□□□ -2.12
CDC34P49427 MRPL42P4-201ENST00000453267 443 ntBASIC1.78□□□□□ -2.12
CDC34P49427 RNU6-717P-201ENST00000459076 104 ntBASIC1.78□□□□□ -2.12
CDC34P49427 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.78□□□□□ -2.12
CDC34P49427 HMGB3P17-201ENST00000504195 649 ntBASIC1.78□□□□□ -2.12
CDC34P49427 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDC34P49427 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.78□□□□□ -2.12
CDC34P49427 RNU6-1261P-201ENST00000517194 104 ntBASIC1.78□□□□□ -2.12
CDC34P49427 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.78□□□□□ -2.12
CDC34P49427 AC022861.1-201ENST00000522981 663 ntBASIC1.78□□□□□ -2.12
CDC34P49427 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.78□□□□□ -2.12
CDC34P49427 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.78□□□□□ -2.12
CDC34P49427 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.78□□□□□ -2.12
CDC34P49427 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.78□□□□□ -2.12
CDC34P49427 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.78□□□□□ -2.12
CDC34P49427 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.78□□□□□ -2.12
CDC34P49427 AC138915.2-201ENST00000569776 97 ntBASIC1.78□□□□□ -2.12
CDC34P49427 MIR4325-201ENST00000583049 90 ntBASIC1.78□□□□□ -2.12
CDC34P49427 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.78□□□□□ -2.12
CDC34P49427 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDC34P49427 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.78□□□□□ -2.12
CDC34P49427 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.78□□□□□ -2.12
CDC34P49427 MIR8084-201ENST00000614105 89 ntBASIC1.78□□□□□ -2.12
CDC34P49427 MIR8057-201ENST00000620957 69 ntBASIC1.78□□□□□ -2.12
CDC34P49427 SNRPEP3-201ENST00000338402 276 ntBASIC1.77□□□□□ -2.13
CDC34P49427 SNORA44-201ENST00000384584 132 ntBASIC1.77□□□□□ -2.13
CDC34P49427 MIR34B-201ENST00000385076 84 ntBASIC1.77□□□□□ -2.13
CDC34P49427 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CDC34P49427 HMGN2P39-201ENST00000398005 273 ntBASIC1.77□□□□□ -2.13
CDC34P49427 DHFRP6-201ENST00000401776 268 ntBASIC1.77□□□□□ -2.13
CDC34P49427 NDUFS5P1-201ENST00000405668 289 ntBASIC1.77□□□□□ -2.13
CDC34P49427 RN7SKP140-201ENST00000411196 284 ntBASIC1.77□□□□□ -2.13
CDC34P49427 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.77□□□□□ -2.13
CDC34P49427 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CDC34P49427 YME1L1P1-201ENST00000429435 297 ntBASIC1.77□□□□□ -2.13
CDC34P49427 MTCYBP15-201ENST00000433123 1127 ntBASIC1.77□□□□□ -2.13
CDC34P49427 SNRPEP9-201ENST00000436794 238 ntBASIC1.77□□□□□ -2.13
CDC34P49427 AC092427.1-201ENST00000439177 601 ntBASIC1.77□□□□□ -2.13
CDC34P49427 MOB1AP2-201ENST00000446060 614 ntBASIC1.77□□□□□ -2.13
CDC34P49427 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.77□□□□□ -2.13
CDC34P49427 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.77□□□□□ -2.13
CDC34P49427 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.77□□□□□ -2.13
CDC34P49427 SNORD109B-201ENST00000458961 67 ntBASIC1.77□□□□□ -2.13
CDC34P49427 SNORD109A-201ENST00000459128 67 ntBASIC1.77□□□□□ -2.13
CDC34P49427 RPL23AP49-201ENST00000492925 468 ntBASIC1.77□□□□□ -2.13
CDC34P49427 AC121161.1-201ENST00000510606 652 ntBASIC1.77□□□□□ -2.13
CDC34P49427 RNA5SP24-201ENST00000516478 95 ntBASIC1.77□□□□□ -2.13
CDC34P49427 SNORA67.7-201ENST00000516664 135 ntBASIC1.77□□□□□ -2.13
CDC34P49427 RNU1-40P-201ENST00000516816 164 ntBASIC1.77□□□□□ -2.13
CDC34P49427 RNU1-97P-201ENST00000516872 164 ntBASIC1.77□□□□□ -2.13
CDC34P49427 AP001189.2-201ENST00000527320 189 ntBASIC1.77□□□□□ -2.13
CDC34P49427 AC021269.2-201ENST00000532318 330 ntBASIC1.77□□□□□ -2.13
CDC34P49427 DUXAP1-201ENST00000556632 463 ntBASIC1.77□□□□□ -2.13
CDC34P49427 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
CDC34P49427 LINC00557-201ENST00000563184 1279 ntBASIC1.77□□□□□ -2.13
CDC34P49427 RPP40P2-201ENST00000603596 712 ntBASIC1.77□□□□□ -2.13
CDC34P49427 AC103810.6-201ENST00000606708 136 ntBASIC1.77□□□□□ -2.13
CDC34P49427 AC097460.3-201ENST00000623099 442 ntBASIC1.77□□□□□ -2.13
CDC34P49427 U2.21-201ENST00000637295 81 ntBASIC1.77□□□□□ -2.13
CDC34P49427 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.77□□□□□ -2.13
CDC34P49427 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.77□□□□□ -2.13
CDC34P49427 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDC34P49427 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDC34P49427 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms