Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RPL23AP78-201ENST00000599928 470 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.25□□□□□ -2.05
CXCL12P48061 AC109809.1-201ENST00000619665 545 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.25□□□□□ -2.05
CXCL12P48061 AC009812.4-201ENST00000569134 1805 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 AC106754.1-201ENST00000562632 1513 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL12P48061 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL12P48061 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL12P48061 AC011460.1-201ENST00000636268 1834 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CXCL12P48061 Y_RNA.140-201ENST00000363474 103 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 RNU6-621P-201ENST00000364752 109 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 SNORA26.9-201ENST00000391322 122 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 MIR1284-201ENST00000408337 120 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 RNU2-43P-201ENST00000410306 190 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 RPL21P32-201ENST00000419877 477 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 AC013410.2-201ENST00000422627 201 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 USP9YP24-201ENST00000434374 697 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 USP9YP17-201ENST00000444617 696 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 PTENP1-201ENST00000447117 1215 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 RNA5SP310-201ENST00000459084 116 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 RN7SL297P-201ENST00000483161 293 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 RPL38P4-201ENST00000502376 214 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 AC109445.1-201ENST00000512356 383 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL12P48061 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL12P48061 ERHP1-201ENST00000523006 310 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 AC087373.1-201ENST00000524920 491 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL12P48061 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.24□□□□□ -2.05
CXCL12P48061 AC090615.1-201ENST00000577519 154 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL12P48061 MTCO2P2-201ENST00000591258 225 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.24□□□□□ -2.05
CXCL12P48061 AC013444.2-201ENST00000603317 787 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 AC009974.1-201ENST00000608881 455 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 AL590099.1-201ENST00000615276 138 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 AC006386.1-201ENST00000619436 415 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 MIR6132-201ENST00000622083 109 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.24□□□□□ -2.05
CXCL12P48061 AL390862.1-201ENST00000635467 1469 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 AC022336.2-201ENST00000568966 2538 ntBASIC2.24□□□□□ -2.05
CXCL12P48061 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CXCL12P48061 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.23□□□□□ -2.05
CXCL12P48061 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
CXCL12P48061 AL161781.1-201ENST00000354277 403 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 RNU4-92P-201ENST00000363783 136 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 RNU6-636P-201ENST00000384598 107 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.23□□□□□ -2.05
CXCL12P48061 AC106883.1-201ENST00000418805 562 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.23□□□□□ -2.05
CXCL12P48061 RPS25P9-201ENST00000435591 252 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 THAP5P1-201ENST00000439089 262 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AC007677.1-201ENST00000445757 515 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AC002381.1-201ENST00000447049 280 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 ARPC3P5-201ENST00000448802 534 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AC009961.3-201ENST00000449832 765 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AL359385.1-201ENST00000456509 365 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 USP9YP25-201ENST00000457708 443 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AC108729.1-201ENST00000487812 947 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.23□□□□□ -2.05
CXCL12P48061 AC109464.2-201ENST00000510242 943 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.23□□□□□ -2.05
CXCL12P48061 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.23□□□□□ -2.05
CXCL12P48061 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.23□□□□□ -2.05
CXCL12P48061 AP001804.3-201ENST00000525146 880 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.23□□□□□ -2.05
CXCL12P48061 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.23□□□□□ -2.05
CXCL12P48061 AL132857.1-201ENST00000555180 708 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.23□□□□□ -2.05
CXCL12P48061 RPP40P2-201ENST00000603596 712 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AC006270.3-201ENST00000605967 1036 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AC009570.1-201ENST00000609599 745 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 AL445264.1-201ENST00000621719 171 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 MIR6766-201ENST00000622641 72 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.23□□□□□ -2.05
CXCL12P48061 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
CXCL12P48061 Y_RNA.164-201ENST00000363709 102 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 Y_RNA.234-201ENST00000364409 97 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 RNU6-906P-201ENST00000384700 70 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 U8.13-201ENST00000390842 128 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AL023284.1-201ENST00000403956 276 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AL591416.1-201ENST00000404015 867 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 FAT1P1-201ENST00000406588 507 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 RPS3AP24-201ENST00000407896 734 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 RNU6-1140P-201ENST00000410517 106 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.22□□□□□ -2.05
CXCL12P48061 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.22□□□□□ -2.05
CXCL12P48061 BX119904.4-201ENST00000424402 301 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC092427.1-202ENST00000430569 476 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.22□□□□□ -2.05
CXCL12P48061 MTCO2P20-201ENST00000437339 673 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 LSM1P1-201ENST00000438629 273 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 MTND5P14-201ENST00000441481 1267 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC009237.8-201ENST00000445492 379 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 DUXAP8-207ENST00000456786 622 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC133134.1-201ENST00000466800 359 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.22□□□□□ -2.05
CXCL12P48061 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms