Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.37□□□□□ -2.03
TNFSF9P41273 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.37□□□□□ -2.03
TNFSF9P41273 AC104072.1-201ENST00000568817 668 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 OR1M4P-201ENST00000589199 287 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 AC005498.1-201ENST00000592125 465 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.37□□□□□ -2.03
TNFSF9P41273 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.37□□□□□ -2.03
TNFSF9P41273 AP003476.1-201ENST00000623984 516 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 AC103798.2-201ENST00000624292 632 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 AC231657.1-201ENST00000624313 397 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 AC099654.8-201ENST00000637757 681 ntBASIC2.37□□□□□ -2.03
TNFSF9P41273 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
TNFSF9P41273 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TNFSF9P41273 SDAD1P2-201ENST00000441308 2028 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.36□□□□□ -2.03
TNFSF9P41273 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TNFSF9P41273 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
TNFSF9P41273 SNORA67.3-201ENST00000384366 140 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 RNU6-253P-201ENST00000384730 105 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 RN7SKP32-201ENST00000410167 303 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 RNU2-25P-201ENST00000411041 191 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 AC068533.2-201ENST00000411872 306 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.36□□□□□ -2.03
TNFSF9P41273 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.36□□□□□ -2.03
TNFSF9P41273 BX119904.4-201ENST00000424402 301 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 ATP5F1P1-201ENST00000433775 569 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 AL049734.2-201ENST00000441066 616 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.36□□□□□ -2.03
TNFSF9P41273 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.36□□□□□ -2.03
TNFSF9P41273 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.36□□□□□ -2.03
TNFSF9P41273 RPL18AP17-201ENST00000455326 198 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 MTND2P39-201ENST00000457230 764 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 AP1S2P1-201ENST00000457344 379 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 RNU7-136P-201ENST00000458819 69 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 RPL30P9-201ENST00000465586 330 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TNFSF9P41273 AC079203.1-201ENST00000487972 404 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 RPPH1-2P-201ENST00000516688 293 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 RNU6-714P-201ENST00000516963 103 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.36□□□□□ -2.03
TNFSF9P41273 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.36□□□□□ -2.03
TNFSF9P41273 GLYCAM1-201ENST00000546596 285 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.36□□□□□ -2.03
TNFSF9P41273 AC024257.5-201ENST00000612739 531 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 AC093838.1-201ENST00000613014 469 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 AL158163.2-201ENST00000619110 700 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.36□□□□□ -2.03
TNFSF9P41273 AP002371.2-201ENST00000624450 503 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.36□□□□□ -2.03
TNFSF9P41273 AP003399.1-201ENST00000637534 361 ntBASIC2.36□□□□□ -2.03
TNFSF9P41273 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.36□□□□□ -2.03
TNFSF9P41273 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TNFSF9P41273 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TNFSF9P41273 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
TNFSF9P41273 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TNFSF9P41273 CR848007.1-201ENST00000442354 1699 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
TNFSF9P41273 RPL21P132-201ENST00000331267 462 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 OR56A5-201ENST00000340110 738 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 RNU6-1078P-201ENST00000364522 103 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 U3.20-201ENST00000390909 217 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 RNU6-952P-201ENST00000391164 108 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFSF9P41273 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.35□□□□□ -2.03
TNFSF9P41273 AL358075.3-201ENST00000426289 226 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFSF9P41273 GTF2IP20-201ENST00000431663 360 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFSF9P41273 FGF7P5-201ENST00000441829 291 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 PIGFP3-201ENST00000441918 722 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 CBWD4P-201ENST00000445695 655 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC002381.1-201ENST00000447049 280 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 DPPA3P1-201ENST00000448050 469 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFSF9P41273 AC104982.1-201ENST00000478775 574 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC138853.1-201ENST00000503549 823 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 SUMO2P6-201ENST00000505273 288 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC098799.2-201ENST00000509466 868 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFSF9P41273 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFSF9P41273 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.35□□□□□ -2.03
TNFSF9P41273 RNA5SP200-201ENST00000516360 103 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 SCARNA16.3-201ENST00000516595 184 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 RNA5SP471-201ENST00000516971 106 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFSF9P41273 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.35□□□□□ -2.03
TNFSF9P41273 LRRC37A5P-203ENST00000580181 585 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 MIR4524B-201ENST00000581569 115 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFSF9P41273 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.35□□□□□ -2.03
TNFSF9P41273 AC112220.2-201ENST00000605513 533 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AL136370.1-201ENST00000608166 691 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC024560.3-201ENST00000608482 349 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC093673.2-201ENST00000609674 331 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFSF9P41273 RNU6-1192P-201ENST00000612197 107 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC023158.2-201ENST00000614876 543 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC079395.3-201ENST00000615161 484 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms