Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.05□□□□□ -1.76
COL15A1P39059 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL15A1P39059 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.05□□□□□ -1.76
COL15A1P39059 ELF2P3-201ENST00000445099 1506 ntBASIC4.05□□□□□ -1.76
COL15A1P39059 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.04□□□□□ -1.76
COL15A1P39059 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL15A1P39059 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
COL15A1P39059 RNU4-12P-201ENST00000365233 139 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 MTCO3P40-201ENST00000392516 676 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AL590002.1-201ENST00000406554 418 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.04□□□□□ -1.76
COL15A1P39059 AC137499.1-201ENST00000427602 88 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 MRPS10P2-201ENST00000431226 381 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 OR4K11P-201ENST00000431829 904 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AC002486.1-201ENST00000435098 391 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.04□□□□□ -1.76
COL15A1P39059 FTH1P1-201ENST00000437933 532 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.04□□□□□ -1.76
COL15A1P39059 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.04□□□□□ -1.76
COL15A1P39059 Z99127.3-201ENST00000448158 395 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AC108059.3-201ENST00000456388 214 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 RPL21P8-201ENST00000465083 535 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AC109927.2-201ENST00000506416 303 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AC010486.1-201ENST00000511793 424 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AC011352.1-201ENST00000512300 793 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 RN7SKP60-201ENST00000516985 239 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AC103783.1-201ENST00000520506 373 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AP004242.1-201ENST00000533701 349 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.04□□□□□ -1.76
COL15A1P39059 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.04□□□□□ -1.76
COL15A1P39059 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.04□□□□□ -1.76
COL15A1P39059 AL158211.4-201ENST00000606988 584 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 AC004908.2-201ENST00000609090 574 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 uc_338.1-201ENST00000612113 180 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.04□□□□□ -1.76
COL15A1P39059 HSPA8P1-201ENST00000425843 1833 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL15A1P39059 SRP72P2-201ENST00000344851 1979 ntBASIC4.04□□□□□ -1.76
COL15A1P39059 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.04□□□□□ -1.76
COL15A1P39059 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL15A1P39059 RNU5A-8P-201ENST00000364102 114 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 Y_RNA.554-201ENST00000384672 102 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
COL15A1P39059 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.03□□□□□ -1.76
COL15A1P39059 TIMM9P1-201ENST00000436122 256 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 TPT1P14-201ENST00000448018 505 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 MTND1P12-201ENST00000455231 147 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 AP000873.1-201ENST00000463987 400 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 AC021146.1-201ENST00000511202 716 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 HMGN1P28-201ENST00000521340 364 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.03□□□□□ -1.76
COL15A1P39059 AL133271.1-201ENST00000538229 291 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.03□□□□□ -1.76
COL15A1P39059 AC090616.5-202ENST00000582111 297 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 RPL12P50-201ENST00000603116 116 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 HMGN2P28-201ENST00000606102 262 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.03□□□□□ -1.76
COL15A1P39059 AL590282.1-201ENST00000610379 1136 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
COL15A1P39059 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.03□□□□□ -1.76
COL15A1P39059 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL15A1P39059 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL15A1P39059 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL15A1P39059 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.03□□□□□ -1.76
COL15A1P39059 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
COL15A1P39059 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
COL15A1P39059 AC244517.1-201ENST00000606030 2086 ntBASIC4.03□□□□□ -1.76
COL15A1P39059 Y_RNA.1-201ENST00000352915 104 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 MIR423-201ENST00000362201 94 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 RNA5SP126-201ENST00000365092 109 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 MIR19A-201ENST00000384878 82 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 RNU2-62P-201ENST00000410868 191 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 RNU6-516P-201ENST00000411381 104 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 MTND1P21-201ENST00000412991 285 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 MTND3P17-201ENST00000416968 344 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 CCDC58P2-201ENST00000417131 366 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.02□□□□□ -1.77
COL15A1P39059 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.02□□□□□ -1.77
COL15A1P39059 AC007283.2-201ENST00000424739 197 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 USP9YP18-201ENST00000425912 695 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AL139132.1-201ENST00000431587 344 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.02□□□□□ -1.77
COL15A1P39059 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC093156.1-201ENST00000440382 670 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 MTATP6P30-201ENST00000443540 664 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC010401.1-201ENST00000463867 348 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
COL15A1P39059 RPS29P26-201ENST00000477483 171 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC023194.1-201ENST00000493084 308 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.02□□□□□ -1.77
COL15A1P39059 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.02□□□□□ -1.77
COL15A1P39059 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.02□□□□□ -1.77
COL15A1P39059 AC011602.1-201ENST00000546484 331 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC126177.3-201ENST00000551839 688 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC007424.1-203ENST00000554613 687 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AL133241.1-201ENST00000556832 487 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.02□□□□□ -1.77
COL15A1P39059 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms