Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.15□□□□□ -2.23
SNCAP37840 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.15□□□□□ -2.23
SNCAP37840 AC135803.1-201ENST00000608748 565 ntBASIC1.15□□□□□ -2.23
SNCAP37840 AP002826.1-201ENST00000608835 315 ntBASIC1.15□□□□□ -2.23
SNCAP37840 MIR7843-201ENST00000622274 79 ntBASIC1.15□□□□□ -2.23
SNCAP37840 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.15□□□□□ -2.23
SNCAP37840 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SNCAP37840 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.14□□□□□ -2.23
SNCAP37840 U8.1-201ENST00000362843 134 ntBASIC1.14□□□□□ -2.23
SNCAP37840 UBE2FP1-201ENST00000416536 447 ntBASIC1.14□□□□□ -2.23
SNCAP37840 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.14□□□□□ -2.23
SNCAP37840 AC244636.1-201ENST00000421152 228 ntBASIC1.14□□□□□ -2.23
SNCAP37840 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SNCAP37840 AC015922.2-201ENST00000435593 184 ntBASIC1.14□□□□□ -2.23
SNCAP37840 AL121601.2-201ENST00000438019 707 ntBASIC1.14□□□□□ -2.23
SNCAP37840 AP000949.1-201ENST00000438328 629 ntBASIC1.14□□□□□ -2.23
SNCAP37840 DNAJC19P4-201ENST00000440115 345 ntBASIC1.14□□□□□ -2.23
SNCAP37840 RPL12P25-201ENST00000455592 494 ntBASIC1.14□□□□□ -2.23
SNCAP37840 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.14□□□□□ -2.23
SNCAP37840 AC093801.2-201ENST00000503966 1050 ntBASIC1.14□□□□□ -2.23
SNCAP37840 AC116337.1-201ENST00000509680 687 ntBASIC1.14□□□□□ -2.23
SNCAP37840 AC012443.1-201ENST00000605605 231 ntBASIC1.14□□□□□ -2.23
SNCAP37840 AC093838.1-201ENST00000613014 469 ntBASIC1.14□□□□□ -2.23
SNCAP37840 AC090116.1-201ENST00000615679 446 ntBASIC1.14□□□□□ -2.23
SNCAP37840 AC073308.1-201ENST00000623696 305 ntBASIC1.14□□□□□ -2.23
SNCAP37840 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SNCAP37840 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
SNCAP37840 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SNCAP37840 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SNCAP37840 SNORA51.12-201ENST00000384448 134 ntBASIC1.13□□□□□ -2.23
SNCAP37840 MIR1323-201ENST00000408090 73 ntBASIC1.13□□□□□ -2.23
SNCAP37840 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.13□□□□□ -2.23
SNCAP37840 HMGB1P49-201ENST00000418882 569 ntBASIC1.13□□□□□ -2.23
SNCAP37840 AL358453.1-201ENST00000422522 250 ntBASIC1.13□□□□□ -2.23
SNCAP37840 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.13□□□□□ -2.23
SNCAP37840 HMGN2P3-201ENST00000433603 273 ntBASIC1.13□□□□□ -2.23
SNCAP37840 HMGN2P5-201ENST00000436882 273 ntBASIC1.13□□□□□ -2.23
SNCAP37840 AC007677.1-201ENST00000445757 515 ntBASIC1.13□□□□□ -2.23
SNCAP37840 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.13□□□□□ -2.23
SNCAP37840 FAM92A1P2-202ENST00000504766 877 ntBASIC1.13□□□□□ -2.23
SNCAP37840 LTV1P1-201ENST00000510683 1237 ntBASIC1.13□□□□□ -2.23
SNCAP37840 RNU1-41P-201ENST00000516161 162 ntBASIC1.13□□□□□ -2.23
SNCAP37840 RNU1-48P-201ENST00000516400 162 ntBASIC1.13□□□□□ -2.23
SNCAP37840 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SNCAP37840 AL133241.1-201ENST00000556832 487 ntBASIC1.13□□□□□ -2.23
SNCAP37840 AC023158.1-201ENST00000561632 1025 ntBASIC1.13□□□□□ -2.23
SNCAP37840 EIF5A2P1-201ENST00000564027 460 ntBASIC1.13□□□□□ -2.23
SNCAP37840 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SNCAP37840 AC012669.1-201ENST00000603209 283 ntBASIC1.13□□□□□ -2.23
SNCAP37840 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SNCAP37840 AP005901.5-201ENST00000545779 1796 ntBASIC1.13□□□□□ -2.23
SNCAP37840 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
SNCAP37840 RNA5SP190-201ENST00000365222 118 ntBASIC1.12□□□□□ -2.23
SNCAP37840 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.12□□□□□ -2.23
SNCAP37840 MIR758-201ENST00000390227 88 ntBASIC1.12□□□□□ -2.23
SNCAP37840 AC016769.3-201ENST00000396562 315 ntBASIC1.12□□□□□ -2.23
SNCAP37840 AL589655.1-201ENST00000405398 482 ntBASIC1.12□□□□□ -2.23
SNCAP37840 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.12□□□□□ -2.23
SNCAP37840 RN7SKP158-201ENST00000410453 326 ntBASIC1.12□□□□□ -2.23
SNCAP37840 RPS7P9-201ENST00000414704 586 ntBASIC1.12□□□□□ -2.23
SNCAP37840 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.12□□□□□ -2.23
SNCAP37840 AL121882.1-201ENST00000422893 417 ntBASIC1.12□□□□□ -2.23
SNCAP37840 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.12□□□□□ -2.23
SNCAP37840 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.12□□□□□ -2.23
SNCAP37840 MTND4P2-201ENST00000507767 1203 ntBASIC1.12□□□□□ -2.23
SNCAP37840 AC022447.1-201ENST00000515358 464 ntBASIC1.12□□□□□ -2.23
SNCAP37840 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
SNCAP37840 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.12□□□□□ -2.23
SNCAP37840 MIR892C-201ENST00000516410 77 ntBASIC1.12□□□□□ -2.23
SNCAP37840 RNU6-798P-201ENST00000516912 103 ntBASIC1.12□□□□□ -2.23
SNCAP37840 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.12□□□□□ -2.23
SNCAP37840 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.12□□□□□ -2.23
SNCAP37840 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.12□□□□□ -2.23
SNCAP37840 AC015720.1-201ENST00000565251 277 ntBASIC1.12□□□□□ -2.23
SNCAP37840 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.12□□□□□ -2.23
SNCAP37840 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.12□□□□□ -2.23
SNCAP37840 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.12□□□□□ -2.23
SNCAP37840 AC108479.2-201ENST00000617314 601 ntBASIC1.12□□□□□ -2.23
SNCAP37840 U4atac.1-201ENST00000618345 95 ntBASIC1.12□□□□□ -2.23
SNCAP37840 AC006338.1-201ENST00000618453 749 ntBASIC1.12□□□□□ -2.23
SNCAP37840 AC025048.6-202ENST00000627667 438 ntBASIC1.12□□□□□ -2.23
SNCAP37840 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.12□□□□□ -2.23
SNCAP37840 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.12□□□□□ -2.23
SNCAP37840 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.12□□□□□ -2.23
SNCAP37840 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
SNCAP37840 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SNCAP37840 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SNCAP37840 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
SNCAP37840 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SNCAP37840 RNU6-60P-201ENST00000364792 103 ntBASIC1.11□□□□□ -2.23
SNCAP37840 RNA5SP126-201ENST00000365092 109 ntBASIC1.11□□□□□ -2.23
SNCAP37840 AL356131.1-201ENST00000405826 414 ntBASIC1.11□□□□□ -2.23
SNCAP37840 BOLA3P4-201ENST00000418151 400 ntBASIC1.11□□□□□ -2.23
SNCAP37840 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.11□□□□□ -2.23
SNCAP37840 HMGB1P9-201ENST00000429856 646 ntBASIC1.11□□□□□ -2.23
SNCAP37840 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.11□□□□□ -2.23
SNCAP37840 AL513124.1-201ENST00000450410 614 ntBASIC1.11□□□□□ -2.23
SNCAP37840 SNORA59A-201ENST00000459326 152 ntBASIC1.11□□□□□ -2.23
SNCAP37840 AC080013.2-201ENST00000460866 323 ntBASIC1.11□□□□□ -2.23
SNCAP37840 SUMO2P6-201ENST00000505273 288 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms