Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD13P35453 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXD13P35453 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD13P35453 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
HOXD13P35453 FABP5P5-201ENST00000515537 406 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 RNA5SP290-201ENST00000517133 127 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 SNORA31.21-201ENST00000517180 77 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 RNA5SP380-201ENST00000517190 98 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXD13P35453 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD13P35453 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD13P35453 AL157394.1-201ENST00000562983 1224 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD13P35453 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXD13P35453 AC108747.1-201ENST00000609508 535 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 AC091953.2-201ENST00000623979 160 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXD13P35453 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXD13P35453 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD13P35453 MTND5P1-201ENST00000445440 1375 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
HOXD13P35453 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXD13P35453 Y_RNA.245-201ENST00000364493 95 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 RNU6-217P-201ENST00000384164 104 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 RNU6-140P-201ENST00000384566 108 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 SNORD15B-201ENST00000384714 146 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 RPL32P35-201ENST00000415214 394 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AC099548.1-201ENST00000421443 426 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AL451062.2-201ENST00000427515 271 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 OR2AS1P-201ENST00000427827 319 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 FCF1P1-201ENST00000432690 571 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXD13P35453 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXD13P35453 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD13P35453 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD13P35453 RBM43P1-201ENST00000476891 1081 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AC138853.1-201ENST00000503549 823 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 SLC25A15P5-201ENST00000508033 253 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AC008885.1-201ENST00000514930 301 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AP003467.2-201ENST00000520175 319 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AC107934.1-201ENST00000522215 217 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD13P35453 MIR3118-1-201ENST00000581787 76 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AC012065.4-201ENST00000602445 679 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AC104010.1-201ENST00000616889 150 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AC092140.2-201ENST00000618027 521 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AC006338.1-201ENST00000618453 749 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AC007318.2-201ENST00000620999 243 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 MIR3651-201ENST00000630427 90 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HOXD13P35453 AL137003.2-201ENST00000606924 2538 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 MTND5P29-201ENST00000458676 1807 ntBASIC3.37□□□□□ -1.87
HOXD13P35453 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXD13P35453 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
HOXD13P35453 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD13P35453 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD13P35453 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD13P35453 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HOXD13P35453 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD13P35453 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
HOXD13P35453 RNU6-270P-201ENST00000364131 105 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 SNORA46-201ENST00000384762 135 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 SNORA48.8-201ENST00000391324 134 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 NDUFS5P1-201ENST00000405668 289 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 RN7SKP220-201ENST00000410611 288 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 ZNF90P2-204ENST00000419323 1075 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD13P35453 AL353678.1-201ENST00000422735 741 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.36□□□□□ -1.87
HOXD13P35453 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXD13P35453 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXD13P35453 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD13P35453 AC006028.1-201ENST00000438379 402 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD13P35453 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD13P35453 DDX3P2-201ENST00000446138 111 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXD13P35453 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD13P35453 MTND3P7-201ENST00000474435 343 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 RN7SL432P-201ENST00000484057 298 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AC006483.1-201ENST00000487308 313 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 MTND2P38-201ENST00000522536 667 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD13P35453 RPS3AP4-201ENST00000555161 764 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD13P35453 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD13P35453 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD13P35453 BNIP3P8-201ENST00000597863 560 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD13P35453 Z99497.2-201ENST00000603634 310 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AC025811.1-201ENST00000604312 472 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AL391813.2-201ENST00000609113 322 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AC096577.2-201ENST00000611455 153 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AC034102.8-201ENST00000615146 484 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 AC099506.2-201ENST00000623074 221 ntBASIC3.36□□□□□ -1.87
HOXD13P35453 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD13P35453 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms