Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC9P31274 AL589823.1-201ENST00000429577 183 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXC9P31274 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC9P31274 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXC9P31274 CEACAMP4-201ENST00000457676 421 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXC9P31274 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC9P31274 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC9P31274 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC9P31274 AC004062.1-201ENST00000509926 645 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC9P31274 RNA5SP282-201ENST00000516355 108 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 RNU6-1003P-201ENST00000517099 105 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AC068657.1-201ENST00000520807 306 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC9P31274 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC9P31274 MTND5P33-201ENST00000571250 1450 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 SNORD84-203ENST00000584275 78 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 BNIP3P8-201ENST00000597863 560 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AC087752.4-201ENST00000605911 462 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AC103591.3-201ENST00000608684 209 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AC012531.5-201ENST00000611375 151 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AL020991.1-201ENST00000612314 373 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AC011939.3-201ENST00000613686 466 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AC008250.2-201ENST00000615261 205 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 AC092140.2-201ENST00000618027 521 ntBASIC3.57□□□□□ -1.84
HOXC9P31274 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC9P31274 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC9P31274 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC9P31274 AC004925.1-201ENST00000624256 2706 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 SNORA51.2-201ENST00000364595 132 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 RNU4-91P-201ENST00000364778 135 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 SNORD6-201ENST00000365444 73 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 RNU6-1181P-201ENST00000384191 106 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 Y_RNA.598-201ENST00000410480 95 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 RNA5SP508-201ENST00000411327 119 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 AC078974.1-201ENST00000411597 223 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.56□□□□□ -1.84
HOXC9P31274 AC006366.1-201ENST00000422002 759 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 BEND7P1-201ENST00000422058 457 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC9P31274 RAC1P7-201ENST00000445367 377 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 RPL23AP55-201ENST00000498163 452 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 CBX3P3-201ENST00000508108 532 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 RNU6-1073P-201ENST00000517182 106 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC9P31274 AL133271.1-201ENST00000538229 291 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC9P31274 AC123904.2-201ENST00000548059 300 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 SETP2-201ENST00000553886 926 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC9P31274 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC9P31274 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.56□□□□□ -1.84
HOXC9P31274 MIR4644-201ENST00000579929 84 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 AC008277.2-201ENST00000605196 797 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 AL139286.2-201ENST00000606838 396 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 AC005046.1-201ENST00000608515 625 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 AC012150.2-201ENST00000621300 544 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 AC092656.1-203ENST00000624134 423 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC9P31274 AF127577.6-201ENST00000623352 2191 ntBASIC3.56□□□□□ -1.84
HOXC9P31274 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC9P31274 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC9P31274 AC009902.3-201ENST00000606235 2172 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AC092104.1-201ENST00000497346 1441 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 RNU6-600P-201ENST00000362524 99 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC9P31274 FCF1P10-201ENST00000407590 479 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 Y_RNA.608-201ENST00000410647 95 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC9P31274 AL451074.5-201ENST00000415894 435 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 CCDC58P2-201ENST00000417131 366 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AC099677.1-201ENST00000420575 175 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 DLGAP5P1-201ENST00000430307 464 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 FTH1P1-201ENST00000437933 532 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC9P31274 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC9P31274 AL022238.1-201ENST00000442557 355 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 TPT1P14-201ENST00000448018 505 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 MTND1P27-201ENST00000451117 902 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 SSXP1-201ENST00000453640 473 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 RPL23AP31-201ENST00000456160 467 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 MTCO2P18-201ENST00000457151 658 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC9P31274 MTCO3P7-201ENST00000510008 774 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.55□□□□□ -1.84
HOXC9P31274 AC022616.6-201ENST00000520479 119 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AC022878.1-201ENST00000530684 149 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AC109635.4-202ENST00000531666 412 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC9P31274 AC018630.1-201ENST00000541376 925 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC9P31274 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC9P31274 AC103987.3-201ENST00000582071 292 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXC9P31274 AP001429.1-201ENST00000602568 530 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 AL022099.1-201ENST00000604551 712 ntBASIC3.55□□□□□ -1.84
HOXC9P31274 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms