Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX1P22670 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX1P22670 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX1P22670 AC091812.1-201ENST00000432235 1948 ntBASIC5.44□□□□□ -1.54
RFX1P22670 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX1P22670 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.44□□□□□ -1.54
RFX1P22670 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX1P22670 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX1P22670 RNU4-44P-201ENST00000363050 141 ntBASIC5.44□□□□□ -1.54
RFX1P22670 RNU6-384P-201ENST00000364900 104 ntBASIC5.44□□□□□ -1.54
RFX1P22670 RNU6-398P-201ENST00000384143 109 ntBASIC5.44□□□□□ -1.54
RFX1P22670 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.44□□□□□ -1.54
RFX1P22670 OR2AM1P-201ENST00000422137 422 ntBASIC5.44□□□□□ -1.54
RFX1P22670 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.44□□□□□ -1.54
RFX1P22670 AC092647.2-201ENST00000452998 253 ntBASIC5.44□□□□□ -1.54
RFX1P22670 RPL17P19-201ENST00000489069 552 ntBASIC5.44□□□□□ -1.54
RFX1P22670 AC078817.1-201ENST00000492623 435 ntBASIC5.44□□□□□ -1.54
RFX1P22670 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.44□□□□□ -1.54
RFX1P22670 AC113155.1-201ENST00000511141 769 ntBASIC5.44□□□□□ -1.54
RFX1P22670 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX1P22670 ENPP7P9-201ENST00000514456 627 ntBASIC5.44□□□□□ -1.54
RFX1P22670 SNORA70.16-201ENST00000516390 95 ntBASIC5.44□□□□□ -1.54
RFX1P22670 RNU4-77P-201ENST00000516692 156 ntBASIC5.44□□□□□ -1.54
RFX1P22670 RNA5SP291-201ENST00000517222 105 ntBASIC5.44□□□□□ -1.54
RFX1P22670 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.44□□□□□ -1.54
RFX1P22670 TRAV32-201ENST00000553993 340 ntBASIC5.44□□□□□ -1.54
RFX1P22670 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RFX1P22670 AC018889.1-201ENST00000605372 397 ntBASIC5.44□□□□□ -1.54
RFX1P22670 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX1P22670 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX1P22670 AC087385.3-201ENST00000620477 187 ntBASIC5.44□□□□□ -1.54
RFX1P22670 AC063976.2-201ENST00000425667 3556 ntBASIC5.44□□□□□ -1.54
RFX1P22670 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX1P22670 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX1P22670 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX1P22670 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX1P22670 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFX1P22670 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX1P22670 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.44□□□□□ -1.54
RFX1P22670 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX1P22670 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.44□□□□□ -1.54
RFX1P22670 SNORA73.1-201ENST00000363107 205 ntBASIC5.43□□□□□ -1.54
RFX1P22670 Y_RNA.485-201ENST00000384395 102 ntBASIC5.43□□□□□ -1.54
RFX1P22670 RNU6-790P-201ENST00000384479 105 ntBASIC5.43□□□□□ -1.54
RFX1P22670 AL022722.2-201ENST00000402519 180 ntBASIC5.43□□□□□ -1.54
RFX1P22670 CTSL3P-202ENST00000412179 788 ntBASIC5.43□□□□□ -1.54
RFX1P22670 AL592148.1-201ENST00000413568 445 ntBASIC5.43□□□□□ -1.54
RFX1P22670 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX1P22670 MRPS18CP6-201ENST00000423587 223 ntBASIC5.43□□□□□ -1.54
RFX1P22670 BX276092.3-201ENST00000424182 230 ntBASIC5.43□□□□□ -1.54
RFX1P22670 AL450023.3-201ENST00000440592 271 ntBASIC5.43□□□□□ -1.54
RFX1P22670 U8.20-201ENST00000459445 131 ntBASIC5.43□□□□□ -1.54
RFX1P22670 RPS17P2-201ENST00000461663 408 ntBASIC5.43□□□□□ -1.54
RFX1P22670 RPL9P32-201ENST00000464118 620 ntBASIC5.43□□□□□ -1.54
RFX1P22670 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX1P22670 ACA59.1-201ENST00000515966 143 ntBASIC5.43□□□□□ -1.54
RFX1P22670 Vault.1-201ENST00000516474 102 ntBASIC5.43□□□□□ -1.54
RFX1P22670 RNA5SP290-201ENST00000517133 127 ntBASIC5.43□□□□□ -1.54
RFX1P22670 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX1P22670 AL645944.1-201ENST00000603857 493 ntBASIC5.43□□□□□ -1.54
RFX1P22670 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.43□□□□□ -1.54
RFX1P22670 AL606534.2-204ENST00000635008 178 ntBASIC5.43□□□□□ -1.54
RFX1P22670 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX1P22670 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX1P22670 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFX1P22670 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX1P22670 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RFX1P22670 RNU1-32P-201ENST00000363937 159 ntBASIC5.42□□□□□ -1.54
RFX1P22670 RNU6-702P-201ENST00000364982 107 ntBASIC5.42□□□□□ -1.54
RFX1P22670 SET-203ENST00000372688 801 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX1P22670 Y_RNA.574-201ENST00000384766 95 ntBASIC5.42□□□□□ -1.54
RFX1P22670 AL078599.1-201ENST00000402075 293 ntBASIC5.42□□□□□ -1.54
RFX1P22670 RNU6-325P-201ENST00000411132 105 ntBASIC5.42□□□□□ -1.54
RFX1P22670 RPL17P36-201ENST00000420302 549 ntBASIC5.42□□□□□ -1.54
RFX1P22670 DPH3P2-201ENST00000422618 250 ntBASIC5.42□□□□□ -1.54
RFX1P22670 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.42□□□□□ -1.54
RFX1P22670 RPL7P2-201ENST00000427639 268 ntBASIC5.42□□□□□ -1.54
RFX1P22670 AC068287.1-201ENST00000430283 295 ntBASIC5.42□□□□□ -1.54
RFX1P22670 AL627311.1-201ENST00000431514 115 ntBASIC5.42□□□□□ -1.54
RFX1P22670 BX323845.1-201ENST00000432417 179 ntBASIC5.42□□□□□ -1.54
RFX1P22670 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.42□□□□□ -1.54
RFX1P22670 AL356981.1-201ENST00000454879 684 ntBASIC5.42□□□□□ -1.54
RFX1P22670 RN7SL517P-201ENST00000462240 305 ntBASIC5.42□□□□□ -1.54
RFX1P22670 AC097484.1-201ENST00000471148 389 ntBASIC5.42□□□□□ -1.54
RFX1P22670 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX1P22670 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.42□□□□□ -1.54
RFX1P22670 RNU6-635P-201ENST00000516651 102 ntBASIC5.42□□□□□ -1.54
RFX1P22670 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX1P22670 AC123912.5-201ENST00000605470 343 ntBASIC5.42□□□□□ -1.54
RFX1P22670 AL121917.1-203ENST00000605534 577 ntBASIC5.42□□□□□ -1.54
RFX1P22670 SNORD58B-201ENST00000607313 66 ntBASIC5.42□□□□□ -1.54
RFX1P22670 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RFX1P22670 AC008568.2-201ENST00000623862 2313 ntBASIC5.42□□□□□ -1.54
RFX1P22670 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFX1P22670 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.42□□□□□ -1.54
RFX1P22670 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
RFX1P22670 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX1P22670 SDAD1P1-202ENST00000524156 2051 ntBASIC5.41□□□□□ -1.54
RFX1P22670 AC007390.2-201ENST00000606229 3803 ntBASIC5.41□□□□□ -1.54
RFX1P22670 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms