Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DPA1P20036 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DPA1P20036 SCGB1D5P-201ENST00000515134 247 ntBASIC2.91□□□□□ -1.94
HLA-DPA1P20036 AP000907.2-201ENST00000530827 353 ntBASIC2.91□□□□□ -1.94
HLA-DPA1P20036 AL359212.1-201ENST00000556608 614 ntBASIC2.91□□□□□ -1.94
HLA-DPA1P20036 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DPA1P20036 NRBF2P5-201ENST00000603087 788 ntBASIC2.91□□□□□ -1.94
HLA-DPA1P20036 RPL23AP88-201ENST00000605759 454 ntBASIC2.91□□□□□ -1.94
HLA-DPA1P20036 AC093732.2-201ENST00000607950 274 ntBASIC2.91□□□□□ -1.94
HLA-DPA1P20036 AC090115.4-201ENST00000609970 188 ntBASIC2.91□□□□□ -1.94
HLA-DPA1P20036 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DPA1P20036 AC135507.2-201ENST00000612443 309 ntBASIC2.91□□□□□ -1.94
HLA-DPA1P20036 AL078595.3-201ENST00000623815 1166 ntBASIC2.91□□□□□ -1.94
HLA-DPA1P20036 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DPA1P20036 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DPA1P20036 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
HLA-DPA1P20036 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DPA1P20036 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HLA-DPA1P20036 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DPA1P20036 ZNF876P-202ENST00000398732 1485 ntBASIC2.9□□□□□ -1.94
HLA-DPA1P20036 AC008264.2-201ENST00000610193 3731 ntBASIC2.9□□□□□ -1.94
HLA-DPA1P20036 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DPA1P20036 RNU6-1167P-201ENST00000363227 94 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 RNU6-461P-201ENST00000364195 107 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 MIR512-1-201ENST00000384913 84 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 RNU6-278P-201ENST00000390945 109 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 MTND1P28-201ENST00000435623 950 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DPA1P20036 AC005094.1-201ENST00000440420 368 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DPA1P20036 AC011825.1-201ENST00000484967 388 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 RNU6-311P-201ENST00000516224 102 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 RNU5A-4P-201ENST00000516588 111 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 RPPH1-2P-201ENST00000516688 293 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 RNU6-64P-201ENST00000517119 105 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 AC100870.1-201ENST00000522035 505 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DPA1P20036 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DPA1P20036 AC083760.1-201ENST00000589621 670 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 BCRP9-201ENST00000605312 388 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 AL355596.1-201ENST00000565399 3996 ntBASIC2.9□□□□□ -1.95
HLA-DPA1P20036 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DPA1P20036 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DPA1P20036 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DPA1P20036 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 MTND5P29-201ENST00000458676 1807 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 SNORA44-201ENST00000384584 132 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 MIR513B-201ENST00000385136 84 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 RPL17P50-201ENST00000396131 546 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AL359634.1-202ENST00000404721 284 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 VPS26BP1-201ENST00000417155 755 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC009969.1-201ENST00000438726 172 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 RPL37P4-201ENST00000448908 268 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 NIPA2P5-201ENST00000452282 464 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 RPL37P6-201ENST00000460682 294 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 RPS3AP14-201ENST00000483907 780 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC080014.1-201ENST00000496877 1201 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 GTF2IP9-201ENST00000502460 301 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 RN7SKP258-201ENST00000517151 304 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 MIR3117-201ENST00000584034 78 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AL450336.1-201ENST00000605180 586 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC092106.3-201ENST00000611308 722 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AL020991.1-201ENST00000612314 373 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC022960.3-201ENST00000619794 441 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AL607023.1-201ENST00000620045 248 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC068057.2-201ENST00000624047 895 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AC091965.5-201ENST00000624785 342 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 AL136313.1-201ENST00000624804 202 ntBASIC2.89□□□□□ -1.95
HLA-DPA1P20036 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DPA1P20036 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 RN7SKP226-201ENST00000364912 300 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 RNU6-750P-201ENST00000390946 107 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms