Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN1P18031 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.37□□□□□ -1.71
PTPN1P18031 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPN1P18031 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN1P18031 HMGB3P15-201ENST00000507326 574 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN1P18031 AC005741.1-201ENST00000511094 432 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 RNA5SP454-201ENST00000517231 127 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN1P18031 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.37□□□□□ -1.71
PTPN1P18031 AC135001.1-201ENST00000544546 283 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN1P18031 OR4H12P-201ENST00000556269 907 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 MIR3160-1-201ENST00000577972 85 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.37□□□□□ -1.71
PTPN1P18031 MIR3672-201ENST00000584290 82 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 AL139395.1-201ENST00000603662 160 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 AL158032.1-201ENST00000605401 106 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 AC080078.3-201ENST00000605407 463 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 AC009570.1-201ENST00000609599 745 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 DUSP12P1-201ENST00000612874 516 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN1P18031 RLIMP1-201ENST00000339626 1680 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPN1P18031 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN1P18031 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN1P18031 Z82217.1-201ENST00000625157 8149 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN1P18031 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN1P18031 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PTPN1P18031 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN1P18031 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPN1P18031 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PTPN1P18031 MAPK10-253ENST00000641010 4072 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 MIR372-201ENST00000362225 67 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 RNU6-254P-201ENST00000363377 107 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 RN7SKP44-201ENST00000363602 316 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 RNU6-474P-201ENST00000384243 107 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 MIR93-201ENST00000385024 80 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 MIR559-201ENST00000385188 96 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 RNU6-370P-201ENST00000411008 104 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 HSPE1P12-201ENST00000412576 301 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 RPL7AP73-201ENST00000413490 353 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 BX682237.1-201ENST00000415016 335 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPN1P18031 AC069285.2-201ENST00000440210 275 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPN1P18031 AC104058.1-201ENST00000448028 297 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 Y_RNA.631-201ENST00000459607 101 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPN1P18031 AC025445.1-201ENST00000502728 300 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPN1P18031 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.36□□□□□ -1.71
PTPN1P18031 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.36□□□□□ -1.71
PTPN1P18031 RN7SKP24-201ENST00000515888 284 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 AC018630.1-201ENST00000541376 925 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPN1P18031 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPN1P18031 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPN1P18031 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPN1P18031 RPL23AP87-202ENST00000573039 466 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 AC067852.3-201ENST00000589177 561 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPN1P18031 AC174048.1-201ENST00000603389 144 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 AL670379.10-201ENST00000604330 253 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 AL670379.9-201ENST00000605428 253 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 AC007619.2-201ENST00000605743 379 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 MIR432-201ENST00000606207 94 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPN1P18031 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPN1P18031 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
PTPN1P18031 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
PTPN1P18031 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PTPN1P18031 AC022893.2-201ENST00000564832 3296 ntBASIC4.36□□□□□ -1.71
PTPN1P18031 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPN1P18031 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPN1P18031 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPN1P18031 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN1P18031 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN1P18031 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN1P18031 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN1P18031 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTPN1P18031 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN1P18031 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN1P18031 Y_RNA.212-201ENST00000364177 102 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 RNA5SP513-201ENST00000364648 118 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 RHOT1P2-201ENST00000366423 333 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN1P18031 RNU6-190P-201ENST00000384154 102 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 MIR606-201ENST00000384851 96 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 MIR513A2-201ENST00000385249 127 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 MIR708-201ENST00000390708 88 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 SNORD70.1-201ENST00000391007 85 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 RNU6-882P-201ENST00000391025 103 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 MTCYBP4-201ENST00000401524 249 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 RNA5SP111-201ENST00000411386 101 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 RPL7P10-201ENST00000417407 739 ntBASIC4.35□□□□□ -1.71
PTPN1P18031 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN1P18031 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN1P18031 AL358472.1-201ENST00000431295 329 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms