Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNU6-390P-201ENST00000516259 103 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 RNU6-928P-201ENST00000516876 104 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 RNU6-64P-201ENST00000517119 105 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 RNA5SP291-201ENST00000517222 105 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.12□□□□□ -1.91
PDGFRAP16234 ATP5F1P5-201ENST00000526403 760 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 AC007115.1-201ENST00000546853 234 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 AC093012.1-202ENST00000549403 582 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFRAP16234 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFRAP16234 AL158211.1-201ENST00000566763 763 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 AC012435.1-202ENST00000568772 240 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFRAP16234 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDGFRAP16234 AC002545.1-201ENST00000592511 181 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 AL451007.1-201ENST00000595491 289 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 AC122133.1-201ENST00000613964 233 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
PDGFRAP16234 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFRAP16234 AC093591.3-201ENST00000634516 308 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFRAP16234 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDGFRAP16234 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.12□□□□□ -1.91
PDGFRAP16234 AL445523.1-201ENST00000451184 1362 ntBASIC3.12□□□□□ -1.91
PDGFRAP16234 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDGFRAP16234 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PDGFRAP16234 AL359634.1-202ENST00000404721 284 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 RNU4-72P-201ENST00000410754 173 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 RPL17P12-201ENST00000413391 526 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.11□□□□□ -1.91
PDGFRAP16234 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.11□□□□□ -1.91
PDGFRAP16234 Z99497.1-201ENST00000421282 135 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 AL353777.1-201ENST00000425552 326 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 RPL7P34-201ENST00000433316 712 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFRAP16234 Z96811.1-201ENST00000445880 108 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 GAPDHP27-201ENST00000447427 1020 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 NANOGNBP1-201ENST00000448444 480 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 ART2BP-201ENST00000453501 499 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFRAP16234 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.11□□□□□ -1.91
PDGFRAP16234 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
PDGFRAP16234 OR5BM1P-201ENST00000512021 366 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFRAP16234 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.11□□□□□ -1.91
PDGFRAP16234 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.11□□□□□ -1.91
PDGFRAP16234 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.11□□□□□ -1.91
PDGFRAP16234 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.11□□□□□ -1.91
PDGFRAP16234 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFRAP16234 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFRAP16234 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.11□□□□□ -1.91
PDGFRAP16234 MIR4293-201ENST00000584305 78 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 MIR4506-201ENST00000584693 77 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 NIFKP6-201ENST00000598115 845 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 RPL23AP78-201ENST00000599928 470 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 KC877982.1-201ENST00000602313 470 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 AC090970.3-201ENST00000612566 866 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 AC009159.1-201ENST00000618386 642 ntBASIC3.11□□□□□ -1.91
PDGFRAP16234 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
PDGFRAP16234 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.11□□□□□ -1.91
PDGFRAP16234 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFRAP16234 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFRAP16234 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFRAP16234 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFRAP16234 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFRAP16234 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFRAP16234 RNU5F-6P-201ENST00000362979 116 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 RNU6-553P-201ENST00000364047 96 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 RNU1-140P-201ENST00000365040 165 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 RNU6-217P-201ENST00000384164 104 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PDGFRAP16234 SNORD115.1-201ENST00000391109 76 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 AL049545.1-201ENST00000401856 572 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.1□□□□□ -1.91
PDGFRAP16234 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.1□□□□□ -1.91
PDGFRAP16234 AC022018.1-201ENST00000430685 241 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFRAP16234 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.1□□□□□ -1.91
PDGFRAP16234 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.1□□□□□ -1.91
PDGFRAP16234 AC118469.1-201ENST00000442943 488 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 snoU13.28-201ENST00000459235 104 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 AC011825.1-201ENST00000484967 388 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 AC080014.1-201ENST00000496877 1201 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 AC009901.1-201ENST00000506703 541 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFRAP16234 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.1□□□□□ -1.91
PDGFRAP16234 RNU6-927P-201ENST00000516199 100 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 MTND4LP18-201ENST00000526864 291 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.1□□□□□ -1.91
PDGFRAP16234 DUXAP5-201ENST00000529668 529 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFRAP16234 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFRAP16234 H3F3AP1-201ENST00000559984 334 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 AL157394.1-201ENST00000562983 1224 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 AC034105.3-201ENST00000565294 442 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 AC145350.1-201ENST00000567426 208 ntBASIC3.1□□□□□ -1.91
PDGFRAP16234 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms