Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.82□□□□□ -1.64
NID1P14543 AC006349.1-201ENST00000555526 235 ntBASIC4.82□□□□□ -1.64
NID1P14543 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.82□□□□□ -1.64
NID1P14543 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NID1P14543 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.82□□□□□ -1.64
NID1P14543 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.82□□□□□ -1.64
NID1P14543 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.82□□□□□ -1.64
NID1P14543 AC091895.1-201ENST00000624494 256 ntBASIC4.82□□□□□ -1.64
NID1P14543 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.82□□□□□ -1.64
NID1P14543 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.82□□□□□ -1.64
NID1P14543 AC100778.3-201ENST00000580060 1750 ntBASIC4.82□□□□□ -1.64
NID1P14543 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NID1P14543 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NID1P14543 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.82□□□□□ -1.64
NID1P14543 ADAM5-202ENST00000399789 1942 ntBASIC4.82□□□□□ -1.64
NID1P14543 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
NID1P14543 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.81□□□□□ -1.64
NID1P14543 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 PRO1804-201ENST00000623780 2050 ntBASIC4.81□□□□□ -1.64
NID1P14543 AL450345.1-202ENST00000605741 3881 ntBASIC4.81□□□□□ -1.64
NID1P14543 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NID1P14543 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 AC008079.2-201ENST00000623543 20396 ntBASIC4.81□□□□□ -1.64
NID1P14543 SNORD63-201ENST00000384262 68 ntBASIC4.81□□□□□ -1.64
NID1P14543 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NID1P14543 GLULP6-201ENST00000399502 913 ntBASIC4.81□□□□□ -1.64
NID1P14543 RPL37P18-201ENST00000411602 243 ntBASIC4.81□□□□□ -1.64
NID1P14543 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.81□□□□□ -1.64
NID1P14543 RPL23AP27-201ENST00000415161 451 ntBASIC4.81□□□□□ -1.64
NID1P14543 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.81□□□□□ -1.64
NID1P14543 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.81□□□□□ -1.64
NID1P14543 PPP1R11P2-201ENST00000423543 382 ntBASIC4.81□□□□□ -1.64
NID1P14543 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.81□□□□□ -1.64
NID1P14543 ELOCP18-201ENST00000434209 337 ntBASIC4.81□□□□□ -1.64
NID1P14543 AC079354.2-201ENST00000453523 154 ntBASIC4.81□□□□□ -1.64
NID1P14543 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.81□□□□□ -1.64
NID1P14543 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.81□□□□□ -1.64
NID1P14543 RPSAP50-201ENST00000481955 852 ntBASIC4.81□□□□□ -1.64
NID1P14543 AC072052.1-201ENST00000496556 306 ntBASIC4.81□□□□□ -1.64
NID1P14543 AC231760.1-201ENST00000498002 260 ntBASIC4.81□□□□□ -1.64
NID1P14543 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.81□□□□□ -1.64
NID1P14543 ENPP7P11-201ENST00000505915 627 ntBASIC4.81□□□□□ -1.64
NID1P14543 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.81□□□□□ -1.64
NID1P14543 HIGD1AP3-201ENST00000515857 278 ntBASIC4.81□□□□□ -1.64
NID1P14543 RNU6-941P-201ENST00000516346 108 ntBASIC4.81□□□□□ -1.64
NID1P14543 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.81□□□□□ -1.64
NID1P14543 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.81□□□□□ -1.64
NID1P14543 HMGN2P6-201ENST00000551091 273 ntBASIC4.81□□□□□ -1.64
NID1P14543 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.81□□□□□ -1.64
NID1P14543 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.81□□□□□ -1.64
NID1P14543 MIR3691-201ENST00000578066 90 ntBASIC4.81□□□□□ -1.64
NID1P14543 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.81□□□□□ -1.64
NID1P14543 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.81□□□□□ -1.64
NID1P14543 RPL23AP78-201ENST00000599928 470 ntBASIC4.81□□□□□ -1.64
NID1P14543 AC123786.2-201ENST00000603459 275 ntBASIC4.81□□□□□ -1.64
NID1P14543 AC011921.3-201ENST00000605540 361 ntBASIC4.81□□□□□ -1.64
NID1P14543 MTND1P7-201ENST00000632801 297 ntBASIC4.81□□□□□ -1.64
NID1P14543 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.81□□□□□ -1.64
NID1P14543 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NID1P14543 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
NID1P14543 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 AL031595.2-201ENST00000624215 19071 ntBASIC4.81□□□□□ -1.64
NID1P14543 AC112198.2-201ENST00000426589 6996 ntBASIC4.81□□□□□ -1.64
NID1P14543 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.81□□□□□ -1.64
NID1P14543 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NID1P14543 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.81□□□□□ -1.64
NID1P14543 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.81□□□□□ -1.64
NID1P14543 AC104623.2-202ENST00000623477 4002 ntBASIC4.81□□□□□ -1.64
NID1P14543 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NID1P14543 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.8□□□□□ -1.64
NID1P14543 RPL23P2-201ENST00000320371 421 ntBASIC4.8□□□□□ -1.64
NID1P14543 U3.3-201ENST00000362986 216 ntBASIC4.8□□□□□ -1.64
NID1P14543 Y_RNA.497-201ENST00000384447 98 ntBASIC4.8□□□□□ -1.64
NID1P14543 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NID1P14543 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 RN7SKP125-201ENST00000410481 302 ntBASIC4.8□□□□□ -1.64
NID1P14543 TMSB10P2-201ENST00000416049 131 ntBASIC4.8□□□□□ -1.64
NID1P14543 AC009238.2-201ENST00000431026 355 ntBASIC4.8□□□□□ -1.64
NID1P14543 AC016712.1-201ENST00000431088 378 ntBASIC4.8□□□□□ -1.64
NID1P14543 AC090774.1-201ENST00000435925 246 ntBASIC4.8□□□□□ -1.64
NID1P14543 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.8□□□□□ -1.64
NID1P14543 BX276092.4-201ENST00000452056 248 ntBASIC4.8□□□□□ -1.64
NID1P14543 AC108161.1-201ENST00000461060 402 ntBASIC4.8□□□□□ -1.64
NID1P14543 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.8□□□□□ -1.64
NID1P14543 ANXA2P1-201ENST00000505539 926 ntBASIC4.8□□□□□ -1.64
NID1P14543 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms