Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC104237.2-201ENST00000612456 443 ntBASIC4.05□□□□□ -1.76
COL11A2P13942 AL157817.1-201ENST00000614264 790 ntBASIC4.05□□□□□ -1.76
COL11A2P13942 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.05□□□□□ -1.76
COL11A2P13942 AF117829.1-206ENST00000621883 3802 ntBASIC4.05□□□□□ -1.76
COL11A2P13942 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.05□□□□□ -1.76
COL11A2P13942 AC018692.3-201ENST00000623929 123 ntBASIC4.05□□□□□ -1.76
COL11A2P13942 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL11A2P13942 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.05□□□□□ -1.76
COL11A2P13942 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL11A2P13942 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
COL11A2P13942 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
COL11A2P13942 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL11A2P13942 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL11A2P13942 SNORA5B-201ENST00000363786 132 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.04□□□□□ -1.76
COL11A2P13942 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.04□□□□□ -1.76
COL11A2P13942 AC234781.4-201ENST00000419384 244 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC006548.1-201ENST00000427470 102 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 YWHAZP8-201ENST00000436935 731 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 MTND3P2-201ENST00000438452 342 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 RPS15AP9-201ENST00000439856 381 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.04□□□□□ -1.76
COL11A2P13942 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.04□□□□□ -1.76
COL11A2P13942 AP000893.1-201ENST00000474462 794 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 EIF4EP3-201ENST00000498782 656 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.04□□□□□ -1.76
COL11A2P13942 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.04□□□□□ -1.76
COL11A2P13942 RNA5SP356-201ENST00000515972 94 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 Y_RNA.682-201ENST00000516457 100 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.04□□□□□ -1.76
COL11A2P13942 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.04□□□□□ -1.76
COL11A2P13942 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.04□□□□□ -1.76
COL11A2P13942 MIR4742-201ENST00000581069 85 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AL353997.4-201ENST00000586196 166 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC006557.5-201ENST00000603126 811 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 7SK.10-201ENST00000621414 298 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 CR381572.1-201ENST00000625098 102 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AL133216.2-202ENST00000634512 349 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A2P13942 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A2P13942 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A2P13942 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.04□□□□□ -1.76
COL11A2P13942 MIR369-201ENST00000362155 70 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 RNU4-44P-201ENST00000363050 141 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 RNU6-169P-201ENST00000365336 107 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
COL11A2P13942 Y_RNA.579-201ENST00000390939 94 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 RNA5SP104-201ENST00000410989 118 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 ELOCP18-201ENST00000434209 337 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AL356535.1-201ENST00000440335 398 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC079781.2-201ENST00000446424 169 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 RNU7-63P-201ENST00000459054 62 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 PCBP2P3-201ENST00000509726 843 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC026801.2-201ENST00000515352 425 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC105029.1-201ENST00000520250 669 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.04□□□□□ -1.76
COL11A2P13942 AP003497.1-201ENST00000528472 562 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.04□□□□□ -1.76
COL11A2P13942 AC068714.1-201ENST00000559623 800 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 LARP7P2-201ENST00000575306 125 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.04□□□□□ -1.76
COL11A2P13942 SNRPGP17-201ENST00000603780 214 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 CYP2C61P-201ENST00000604072 290 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 AC013412.1-201ENST00000610687 192 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 MIR486-1-201ENST00000612171 68 ntBASIC4.04□□□□□ -1.76
COL11A2P13942 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.04□□□□□ -1.76
COL11A2P13942 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.04□□□□□ -1.76
COL11A2P13942 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.04□□□□□ -1.76
COL11A2P13942 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.04□□□□□ -1.76
COL11A2P13942 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL11A2P13942 AL118496.1-201ENST00000440201 1812 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.03□□□□□ -1.76
COL11A2P13942 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL11A2P13942 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL11A2P13942 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL11A2P13942 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.03□□□□□ -1.76
COL11A2P13942 AC027290.2-201ENST00000623210 18662 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.03□□□□□ -1.76
COL11A2P13942 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.03□□□□□ -1.76
COL11A2P13942 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL11A2P13942 RNU6-744P-201ENST00000365557 107 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 RNU6-1316P-201ENST00000384242 108 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 RNU6-301P-201ENST00000384277 107 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 RPL31P52-201ENST00000407532 367 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.03□□□□□ -1.76
COL11A2P13942 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.03□□□□□ -1.76
COL11A2P13942 RPS26P47-201ENST00000427219 348 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 GTF2IP13-201ENST00000438487 386 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 AC105272.1-201ENST00000438604 198 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 HMGB1P18-201ENST00000438801 619 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.03□□□□□ -1.76
COL11A2P13942 RPS26P3-201ENST00000470205 348 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 AC004057.1-201ENST00000485827 348 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 AC090096.1-201ENST00000489168 390 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.03□□□□□ -1.76
COL11A2P13942 TMEM248P1-201ENST00000510579 951 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.03□□□□□ -1.76
COL11A2P13942 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.03□□□□□ -1.76
COL11A2P13942 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms