Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.8□□□□□ -1.96
TOP1P11387 AC124947.2-202ENST00000552735 133 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.8□□□□□ -1.96
TOP1P11387 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.8□□□□□ -1.96
TOP1P11387 TPMTP1-201ENST00000592307 737 ntBASIC2.8□□□□□ -1.96
TOP1P11387 DUXAP3-201ENST00000603616 594 ntBASIC2.8□□□□□ -1.96
TOP1P11387 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.8□□□□□ -1.96
TOP1P11387 AC007938.3-201ENST00000604965 623 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AC046143.2-201ENST00000609789 160 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AC024257.5-201ENST00000612739 531 ntBASIC2.8□□□□□ -1.96
TOP1P11387 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AC023158.2-201ENST00000614876 543 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AC008147.4-201ENST00000617570 1204 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.8□□□□□ -1.96
TOP1P11387 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.8□□□□□ -1.96
TOP1P11387 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TOP1P11387 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
TOP1P11387 AC007785.2-201ENST00000598627 1916 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TOP1P11387 Y_RNA.25-201ENST00000362528 102 ntBASIC2.79□□□□□ -1.96
TOP1P11387 RNU4-28P-201ENST00000364739 141 ntBASIC2.79□□□□□ -1.96
TOP1P11387 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TOP1P11387 RNU6-301P-201ENST00000384277 107 ntBASIC2.79□□□□□ -1.96
TOP1P11387 MIR514A1-201ENST00000385133 98 ntBASIC2.79□□□□□ -1.96
TOP1P11387 ELOCP9-201ENST00000418624 239 ntBASIC2.79□□□□□ -1.96
TOP1P11387 XKRYP1-201ENST00000423438 492 ntBASIC2.79□□□□□ -1.96
TOP1P11387 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.79□□□□□ -1.96
TOP1P11387 MTCO1P3-201ENST00000429327 192 ntBASIC2.79□□□□□ -1.96
TOP1P11387 XKRYP2-201ENST00000432915 492 ntBASIC2.79□□□□□ -1.96
TOP1P11387 AC084290.1-201ENST00000434995 374 ntBASIC2.79□□□□□ -1.96
TOP1P11387 AL445687.1-201ENST00000439946 251 ntBASIC2.79□□□□□ -1.96
TOP1P11387 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.79□□□□□ -1.96
TOP1P11387 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.79□□□□□ -1.96
TOP1P11387 BMI1P1-201ENST00000445879 941 ntBASIC2.79□□□□□ -1.96
TOP1P11387 RPL39P6-201ENST00000448289 150 ntBASIC2.79□□□□□ -1.96
TOP1P11387 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
TOP1P11387 AC005297.2-201ENST00000450430 606 ntBASIC2.79□□□□□ -1.96
TOP1P11387 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.79□□□□□ -1.96
TOP1P11387 AC090453.1-201ENST00000495560 436 ntBASIC2.79□□□□□ -1.96
TOP1P11387 MTCYBP35-201ENST00000503630 1137 ntBASIC2.79□□□□□ -1.96
TOP1P11387 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.79□□□□□ -1.96
TOP1P11387 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.79□□□□□ -1.96
TOP1P11387 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.79□□□□□ -1.96
TOP1P11387 AC008413.1-201ENST00000511864 177 ntBASIC2.79□□□□□ -1.96
TOP1P11387 TTC39CP1-201ENST00000512513 755 ntBASIC2.79□□□□□ -1.96
TOP1P11387 AC008837.2-201ENST00000513076 418 ntBASIC2.79□□□□□ -1.96
TOP1P11387 RNA5SP24-201ENST00000516478 95 ntBASIC2.79□□□□□ -1.96
TOP1P11387 RN7SKP287-201ENST00000516546 266 ntBASIC2.79□□□□□ -1.96
TOP1P11387 SUB1P1-201ENST00000524415 382 ntBASIC2.79□□□□□ -1.96
TOP1P11387 COX6CP5-201ENST00000527162 228 ntBASIC2.79□□□□□ -1.96
TOP1P11387 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.79□□□□□ -1.96
TOP1P11387 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.79□□□□□ -1.96
TOP1P11387 SNORD53-201ENST00000579969 78 ntBASIC2.79□□□□□ -1.96
TOP1P11387 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.79□□□□□ -1.96
TOP1P11387 AC061975.8-201ENST00000587058 721 ntBASIC2.79□□□□□ -1.96
TOP1P11387 AC234772.3-201ENST00000602277 528 ntBASIC2.79□□□□□ -1.96
TOP1P11387 AC067747.1-201ENST00000608026 250 ntBASIC2.79□□□□□ -1.96
TOP1P11387 AL137847.3-201ENST00000611521 109 ntBASIC2.79□□□□□ -1.96
TOP1P11387 AC107075.1-201ENST00000613695 314 ntBASIC2.79□□□□□ -1.96
TOP1P11387 SNHG22-203ENST00000617833 660 ntBASIC2.79□□□□□ -1.96
TOP1P11387 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
TOP1P11387 ZNF271P-202ENST00000465539 1970 ntBASIC2.78□□□□□ -1.96
TOP1P11387 RNU6-636P-201ENST00000384598 107 ntBASIC2.78□□□□□ -1.96
TOP1P11387 U3.20-201ENST00000390909 217 ntBASIC2.78□□□□□ -1.96
TOP1P11387 RPL22P18-201ENST00000417197 377 ntBASIC2.78□□□□□ -1.96
TOP1P11387 SUMO1P4-201ENST00000429430 302 ntBASIC2.78□□□□□ -1.96
TOP1P11387 CR769767.1-201ENST00000436337 346 ntBASIC2.78□□□□□ -1.96
TOP1P11387 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.78□□□□□ -1.96
TOP1P11387 RPS15AP17-201ENST00000470598 390 ntBASIC2.78□□□□□ -1.96
TOP1P11387 MTCYBP17-201ENST00000503579 789 ntBASIC2.78□□□□□ -1.96
TOP1P11387 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.78□□□□□ -1.96
TOP1P11387 RN7SKP31-201ENST00000516354 278 ntBASIC2.78□□□□□ -1.96
TOP1P11387 RNA5SP402-201ENST00000517148 110 ntBASIC2.78□□□□□ -1.96
TOP1P11387 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.78□□□□□ -1.96
TOP1P11387 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
TOP1P11387 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TOP1P11387 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
TOP1P11387 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.78□□□□□ -1.96
TOP1P11387 AC091544.4-201ENST00000555268 342 ntBASIC2.78□□□□□ -1.96
TOP1P11387 MTND4P33-201ENST00000556706 766 ntBASIC2.78□□□□□ -1.96
TOP1P11387 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.78□□□□□ -1.96
TOP1P11387 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.78□□□□□ -1.96
TOP1P11387 MIR4446-201ENST00000578505 67 ntBASIC2.78□□□□□ -1.96
TOP1P11387 MIR4637-201ENST00000582405 84 ntBASIC2.78□□□□□ -1.96
TOP1P11387 AP001269.3-201ENST00000588718 329 ntBASIC2.78□□□□□ -1.96
TOP1P11387 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.78□□□□□ -1.96
TOP1P11387 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.78□□□□□ -1.96
TOP1P11387 AL596245.1-201ENST00000618994 362 ntBASIC2.78□□□□□ -1.96
TOP1P11387 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
TOP1P11387 ELF2P3-201ENST00000445099 1506 ntBASIC2.78□□□□□ -1.97
TOP1P11387 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TOP1P11387 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
TOP1P11387 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TOP1P11387 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TOP1P11387 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TOP1P11387 SNRPEP2-201ENST00000397592 279 ntBASIC2.77□□□□□ -1.97
TOP1P11387 RNU4-53P-201ENST00000410828 140 ntBASIC2.77□□□□□ -1.97
TOP1P11387 RN7SKP140-201ENST00000411196 284 ntBASIC2.77□□□□□ -1.97
TOP1P11387 AL161449.1-201ENST00000414531 1199 ntBASIC2.77□□□□□ -1.97
TOP1P11387 AC007435.1-201ENST00000421086 415 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms