Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.29□□□□□ -2.04
TPM1P09493 SNORA31.6-201ENST00000516241 130 ntBASIC2.29□□□□□ -2.04
TPM1P09493 CYCSP26-201ENST00000534107 320 ntBASIC2.29□□□□□ -2.04
TPM1P09493 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TPM1P09493 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.29□□□□□ -2.04
TPM1P09493 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.29□□□□□ -2.04
TPM1P09493 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.29□□□□□ -2.04
TPM1P09493 AL359212.1-201ENST00000556608 614 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.29□□□□□ -2.04
TPM1P09493 AC005951.2-201ENST00000576282 495 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AC090615.1-201ENST00000577519 154 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AC090330.1-201ENST00000588646 764 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AC026790.2-201ENST00000606282 430 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AC007349.4-201ENST00000608114 532 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AC002550.2-201ENST00000621246 394 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.29□□□□□ -2.04
TPM1P09493 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TPM1P09493 AC010889.1-201ENST00000566193 2666 ntBASIC2.29□□□□□ -2.04
TPM1P09493 Y_RNA.25-201ENST00000362528 102 ntBASIC2.28□□□□□ -2.04
TPM1P09493 SNORA80A-201ENST00000363922 136 ntBASIC2.28□□□□□ -2.04
TPM1P09493 RNA5SP125-201ENST00000364843 120 ntBASIC2.28□□□□□ -2.04
TPM1P09493 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TPM1P09493 RPL23AP29-201ENST00000397284 453 ntBASIC2.28□□□□□ -2.04
TPM1P09493 RPS4XP8-201ENST00000402039 771 ntBASIC2.28□□□□□ -2.04
TPM1P09493 AL450338.1-201ENST00000407987 512 ntBASIC2.28□□□□□ -2.04
TPM1P09493 AL030996.1-201ENST00000411430 235 ntBASIC2.28□□□□□ -2.04
TPM1P09493 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.28□□□□□ -2.04
TPM1P09493 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.28□□□□□ -2.04
TPM1P09493 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.28□□□□□ -2.04
TPM1P09493 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.28□□□□□ -2.04
TPM1P09493 AL451074.3-201ENST00000437709 472 ntBASIC2.28□□□□□ -2.04
TPM1P09493 AC092427.1-201ENST00000439177 601 ntBASIC2.28□□□□□ -2.04
TPM1P09493 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.28□□□□□ -2.04
TPM1P09493 AC124916.1-201ENST00000444020 547 ntBASIC2.28□□□□□ -2.04
TPM1P09493 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.28□□□□□ -2.04
TPM1P09493 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
TPM1P09493 AC068781.1-201ENST00000488231 618 ntBASIC2.28□□□□□ -2.04
TPM1P09493 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TPM1P09493 TMEM251P1-201ENST00000503717 318 ntBASIC2.28□□□□□ -2.04
TPM1P09493 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.28□□□□□ -2.04
TPM1P09493 AC022861.1-201ENST00000522981 663 ntBASIC2.28□□□□□ -2.04
TPM1P09493 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.28□□□□□ -2.04
TPM1P09493 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
TPM1P09493 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TPM1P09493 AC010678.1-201ENST00000614118 713 ntBASIC2.28□□□□□ -2.04
TPM1P09493 AC025048.6-202ENST00000627667 438 ntBASIC2.28□□□□□ -2.04
TPM1P09493 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.28□□□□□ -2.05
TPM1P09493 AC009487.4-201ENST00000624969 3585 ntBASIC2.28□□□□□ -2.05
TPM1P09493 SNRPEP3-201ENST00000338402 276 ntBASIC2.27□□□□□ -2.05
TPM1P09493 MIR208A-201ENST00000362287 71 ntBASIC2.27□□□□□ -2.05
TPM1P09493 RNU6-525P-201ENST00000363685 104 ntBASIC2.27□□□□□ -2.05
TPM1P09493 MIR218-1-201ENST00000384999 110 ntBASIC2.27□□□□□ -2.05
TPM1P09493 MIR17-201ENST00000385012 84 ntBASIC2.27□□□□□ -2.05
TPM1P09493 SNORA11.4-201ENST00000408823 129 ntBASIC2.27□□□□□ -2.05
TPM1P09493 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TPM1P09493 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.27□□□□□ -2.05
TPM1P09493 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.27□□□□□ -2.05
TPM1P09493 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.27□□□□□ -2.05
TPM1P09493 BPY2DP-201ENST00000422208 265 ntBASIC2.27□□□□□ -2.05
TPM1P09493 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.27□□□□□ -2.05
TPM1P09493 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.27□□□□□ -2.05
TPM1P09493 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.27□□□□□ -2.05
TPM1P09493 PSPHP1-201ENST00000450062 261 ntBASIC2.27□□□□□ -2.05
TPM1P09493 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.27□□□□□ -2.05
TPM1P09493 AC080013.2-201ENST00000460866 323 ntBASIC2.27□□□□□ -2.05
TPM1P09493 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.27□□□□□ -2.05
TPM1P09493 AC096576.1-201ENST00000489014 359 ntBASIC2.27□□□□□ -2.05
TPM1P09493 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.27□□□□□ -2.05
TPM1P09493 AC093677.1-201ENST00000514414 678 ntBASIC2.27□□□□□ -2.05
TPM1P09493 NRON-201ENST00000517270 370 ntBASIC2.27□□□□□ -2.05
TPM1P09493 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.27□□□□□ -2.05
TPM1P09493 AL731537.2-201ENST00000561565 951 ntBASIC2.27□□□□□ -2.05
TPM1P09493 AC138915.2-201ENST00000569776 97 ntBASIC2.27□□□□□ -2.05
TPM1P09493 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.27□□□□□ -2.05
TPM1P09493 MIR6798-201ENST00000612887 67 ntBASIC2.27□□□□□ -2.05
TPM1P09493 AL392048.1-201ENST00000613946 534 ntBASIC2.27□□□□□ -2.05
TPM1P09493 AL118556.2-201ENST00000614375 824 ntBASIC2.27□□□□□ -2.05
TPM1P09493 AP001486.3-201ENST00000615334 372 ntBASIC2.27□□□□□ -2.05
TPM1P09493 AL162373.1-201ENST00000620433 407 ntBASIC2.27□□□□□ -2.05
TPM1P09493 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.27□□□□□ -2.05
TPM1P09493 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.27□□□□□ -2.05
TPM1P09493 MIR1322-201ENST00000638013 71 ntBASIC2.27□□□□□ -2.05
TPM1P09493 MKKS-204ENST00000639674 192 ntBASIC2.27□□□□□ -2.05
TPM1P09493 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TPM1P09493 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
TPM1P09493 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TPM1P09493 AL445529.1-201ENST00000398713 389 ntBASIC2.26□□□□□ -2.05
TPM1P09493 RPL17P12-201ENST00000413391 526 ntBASIC2.26□□□□□ -2.05
TPM1P09493 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
TPM1P09493 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.26□□□□□ -2.05
TPM1P09493 AC003685.2-201ENST00000422795 395 ntBASIC2.26□□□□□ -2.05
TPM1P09493 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.26□□□□□ -2.05
TPM1P09493 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.26□□□□□ -2.05
TPM1P09493 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.26□□□□□ -2.05
TPM1P09493 HIGD1AP2-201ENST00000446367 280 ntBASIC2.26□□□□□ -2.05
TPM1P09493 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TPM1P09493 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.26□□□□□ -2.05
TPM1P09493 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.26□□□□□ -2.05
TPM1P09493 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.26□□□□□ -2.05
TPM1P09493 MIR892C-201ENST00000516410 77 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms