Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MIR3616-201ENST00000584070 92 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AL355877.2-201ENST00000603670 358 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 DUXAP11-201ENST00000603858 526 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AC100814.1-201ENST00000606963 623 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AC004009.2-201ENST00000623016 728 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 AC012640.5-201ENST00000623897 319 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 MIR203B-201ENST00000636080 86 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 U6.101-201ENST00000637707 76 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 MIR7515-201ENST00000637837 67 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.85□□□□□ -2.11
HLA-DQB2P05538 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DQB2P05538 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 RNU6-492P-201ENST00000363035 104 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 SUGT1P1-201ENST00000379514 476 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 VN1R51P-201ENST00000411675 945 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC027644.1-201ENST00000419595 298 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC019178.2-201ENST00000423595 505 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 BX276092.3-201ENST00000424182 230 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 MTND2P5-201ENST00000432656 1006 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 HMGB3P12-201ENST00000438745 556 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 BNIP3P2-201ENST00000441221 577 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AL513124.1-201ENST00000450410 614 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC090515.1-201ENST00000465295 476 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 RNU6-1256P-201ENST00000516539 103 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AP002748.2-201ENST00000528671 348 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC124947.2-202ENST00000552735 133 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AL391261.3-201ENST00000557194 520 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC023824.2-201ENST00000566185 400 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DQB2P05538 RPAP2P1-201ENST00000603626 1168 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AP003973.1-201ENST00000604639 691 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC135507.1-201ENST00000607214 561 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 AC093673.2-201ENST00000609674 331 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 DUXAP10-204ENST00000612052 616 ntBASIC1.84□□□□□ -2.11
HLA-DQB2P05538 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.84□□□□□ -2.12
HLA-DQB2P05538 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HLA-DQB2P05538 CCT4P2-201ENST00000233836 1548 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 SNORA38-201ENST00000363946 132 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 U8.13-201ENST00000390842 128 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AL355497.1-201ENST00000406262 551 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AC092047.1-201ENST00000424997 240 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 MTCYBP32-201ENST00000427945 1084 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 HMGN2P3-201ENST00000433603 273 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 MTCYBP45-201ENST00000435243 565 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 HMGN2P5-201ENST00000436882 273 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 USP9YP15-201ENST00000442391 422 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 MTND2P30-201ENST00000456663 382 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AL049874.1-201ENST00000489560 388 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AC107393.1-201ENST00000512403 346 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 RNA5SP182-201ENST00000516064 82 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 SNORA31.18-201ENST00000517043 134 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AC022634.1-201ENST00000520765 532 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AK6P1-201ENST00000540219 478 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AC027807.1-201ENST00000559921 996 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AGGF1P5-201ENST00000567900 919 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AC124283.4-201ENST00000581815 456 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQB2P05538 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DQB2P05538 OR10AB1P-201ENST00000609613 938 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AC009090.3-201ENST00000616553 565 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 AL031601.2-202ENST00000622650 282 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 KPNA2P1-201ENST00000458289 1591 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 HSPA8P4-201ENST00000511877 1920 ntBASIC1.83□□□□□ -2.12
HLA-DQB2P05538 OR4G2P-202ENST00000641004 1759 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 MIR583-201ENST00000384846 75 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 SNORA40.18-201ENST00000391200 128 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 MIR1294-201ENST00000408503 142 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 RPS7P9-201ENST00000414704 586 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 LUZP4P1-201ENST00000415420 344 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AC018630.2-202ENST00000422992 927 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AL590233.1-201ENST00000430017 456 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.82□□□□□ -2.12
HLA-DQB2P05538 RSL24D1P8-201ENST00000434442 492 ntBASIC1.82□□□□□ -2.12
HLA-DQB2P05538 AL049734.2-201ENST00000441066 616 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms