Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
MT-ND1P03886 SNORA75-201ENST00000384158 137 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 RNU6-198P-201ENST00000384258 104 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 SNORA36C-201ENST00000384289 132 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 SNORD15B-201ENST00000384714 146 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 MIR449B-201ENST00000384995 97 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 RNU4-47P-201ENST00000410876 114 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 SPA17P1-201ENST00000416656 452 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.81□□□□□ -1.96
MT-ND1P03886 AL645937.1-202ENST00000421799 937 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 MTCO2P34-201ENST00000421994 607 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.81□□□□□ -1.96
MT-ND1P03886 AL589823.1-201ENST00000429577 183 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.81□□□□□ -1.96
MT-ND1P03886 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.81□□□□□ -1.96
MT-ND1P03886 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.81□□□□□ -1.96
MT-ND1P03886 RPS29P6-201ENST00000438196 145 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.81□□□□□ -1.96
MT-ND1P03886 PGBD4P3-201ENST00000440731 581 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AL049734.2-201ENST00000441066 616 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.81□□□□□ -1.96
MT-ND1P03886 TPT1P14-201ENST00000448018 505 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 RN7SL601P-201ENST00000471221 293 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.81□□□□□ -1.96
MT-ND1P03886 RNU6-1282P-201ENST00000516735 96 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 SNORA31.21-201ENST00000517180 77 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AP003181.2-201ENST00000528941 181 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC022878.1-201ENST00000530684 149 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC007536.1-201ENST00000533382 349 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.81□□□□□ -1.96
MT-ND1P03886 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MT-ND1P03886 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.81□□□□□ -1.96
MT-ND1P03886 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.81□□□□□ -1.96
MT-ND1P03886 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AMZ2P1-203ENST00000565833 850 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 RPL23AP84-201ENST00000571193 464 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC103987.3-201ENST00000582071 292 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 MIR3158-1-201ENST00000583596 81 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC004223.2-201ENST00000590309 544 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC013553.2-201ENST00000604244 589 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC064872.1-201ENST00000604823 1072 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC087752.4-201ENST00000605911 462 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.81□□□□□ -1.96
MT-ND1P03886 OR10AB1P-201ENST00000609613 938 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC069234.5-201ENST00000611056 416 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC019176.2-201ENST00000611579 315 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 AC009159.1-201ENST00000618386 642 ntBASIC2.81□□□□□ -1.96
MT-ND1P03886 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MT-ND1P03886 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
MT-ND1P03886 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
MT-ND1P03886 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.81□□□□□ -1.96
MT-ND1P03886 OR4G2P-202ENST00000641004 1759 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MT-ND1P03886 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MT-ND1P03886 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
MT-ND1P03886 RPL9P7-201ENST00000330965 580 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MT-ND1P03886 RNU4-24P-201ENST00000364565 139 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 RNU4-91P-201ENST00000364778 135 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 Y_RNA.359-201ENST00000365498 102 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 SNORA7.4-201ENST00000384249 137 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 MIR19A-201ENST00000384878 82 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 MIR183-201ENST00000384958 110 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND1P03886 AC069157.1-201ENST00000421749 137 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 HMGN2P30-201ENST00000423237 256 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 DLGAP5P1-201ENST00000430307 464 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AL512844.2-201ENST00000433990 593 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND1P03886 UBE2V1P13-201ENST00000436983 439 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.8□□□□□ -1.96
MT-ND1P03886 Z75741.1-201ENST00000446793 314 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AC016696.1-201ENST00000446949 318 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 RNU6-956P-201ENST00000458868 103 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 snoU13.28-201ENST00000459235 104 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 RN7SL863P-201ENST00000462370 296 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 RAP1BP2-201ENST00000478270 544 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AC112204.1-201ENST00000502591 103 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MT-ND1P03886 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.8□□□□□ -1.96
MT-ND1P03886 ARL4AP2-201ENST00000507378 601 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.8□□□□□ -1.96
MT-ND1P03886 AC079140.3-201ENST00000511111 550 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND1P03886 SNORA67.7-201ENST00000516664 135 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 RNU6-201P-201ENST00000517100 61 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 DUXAP2-201ENST00000519198 589 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.8□□□□□ -1.96
MT-ND1P03886 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.8□□□□□ -1.96
MT-ND1P03886 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.8□□□□□ -1.96
MT-ND1P03886 MTCYBP33-201ENST00000575007 1130 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AC009977.1-201ENST00000586015 570 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 HMGN1P30-201ENST00000589286 268 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AC107871.2-201ENST00000612894 502 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AC010678.1-201ENST00000614118 713 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AC006133.1-201ENST00000617106 264 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 AC099506.2-201ENST00000623074 221 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 U6.105-201ENST00000637379 88 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 LRRC77P-213ENST00000637727 880 ntBASIC2.8□□□□□ -1.96
MT-ND1P03886 MIR622-201ENST00000638396 96 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms