Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RNU6-2-201ENST00000384627 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-9-201ENST00000384776 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-33P-201ENST00000384793 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU2-25P-201ENST00000411041 191 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 AC092634.2-201ENST00000428146 1010 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 UBE2V1P6-201ENST00000430840 422 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 AL512637.2-201ENST00000431287 1256 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 SNRPEP4-201ENST00000435815 279 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.66□□□□□ -2.14
COL4A1P02462 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.66□□□□□ -2.14
COL4A1P02462 RPL7P55-201ENST00000450522 746 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 ATP5J2P3-201ENST00000451550 258 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.66□□□□□ -2.14
COL4A1P02462 RPS27P23-201ENST00000487608 251 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.66□□□□□ -2.14
COL4A1P02462 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.66□□□□□ -2.14
COL4A1P02462 HIGD1AP6-201ENST00000521833 279 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 AP003168.1-201ENST00000530091 307 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.66□□□□□ -2.14
COL4A1P02462 BPTFP1-201ENST00000579209 492 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 SNRPGP15-201ENST00000600149 222 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.66□□□□□ -2.14
COL4A1P02462 AP002906.1-201ENST00000603405 233 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-6P-201ENST00000606623 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 AC124016.2-201ENST00000610058 665 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 PVT1_3.1-201ENST00000620853 95 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU6-156P-201ENST00000621869 107 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.66□□□□□ -2.14
COL4A1P02462 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.66□□□□□ -2.14
COL4A1P02462 AC008568.2-201ENST00000623862 2313 ntBASIC1.66□□□□□ -2.14
COL4A1P02462 RNU1-93P-201ENST00000364704 169 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 U6.112-201ENST00000384129 70 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 RNU6-1226P-201ENST00000384317 107 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
COL4A1P02462 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.65□□□□□ -2.15
COL4A1P02462 UBE2D3P3-201ENST00000426992 425 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 AC010301.1-201ENST00000473936 355 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 RBM43P1-201ENST00000476891 1081 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.65□□□□□ -2.15
COL4A1P02462 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
COL4A1P02462 MTND2P31-201ENST00000512602 616 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 AC006499.2-201ENST00000513470 337 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 RPPH1-2P-201ENST00000516688 293 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 AC121758.2-201ENST00000553271 193 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 AC074051.3-201ENST00000570238 358 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 AL078603.1-201ENST00000603824 313 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 AP000943.4-201ENST00000622912 357 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 AL356094.1-201ENST00000624663 1212 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.65□□□□□ -2.15
COL4A1P02462 AL590396.4-201ENST00000636779 956 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.65□□□□□ -2.15
COL4A1P02462 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
COL4A1P02462 PABPC1P9-201ENST00000426076 1612 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 ZNF734P-201ENST00000419494 1534 ntBASIC1.65□□□□□ -2.15
COL4A1P02462 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL4A1P02462 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A1P02462 ANAPC10P1-201ENST00000395991 556 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 RNU6-1077P-201ENST00000410506 102 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 RPS15AP40-201ENST00000419621 391 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC241520.1-201ENST00000422654 1099 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A1P02462 AL929288.2-201ENST00000446368 407 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC015724.1-201ENST00000478577 156 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A1P02462 AC008427.1-201ENST00000503102 655 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC084024.2-201ENST00000503480 791 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 RNU6-488P-201ENST00000515918 99 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 RN7SKP49-201ENST00000516675 260 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.64□□□□□ -2.15
COL4A1P02462 AP002748.2-201ENST00000528671 348 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A1P02462 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A1P02462 ACTR3BP3-201ENST00000565577 979 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A1P02462 MIR4504-201ENST00000577413 92 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 MIR4789-201ENST00000577469 82 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A1P02462 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.64□□□□□ -2.15
COL4A1P02462 AC098483.2-201ENST00000603158 454 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.64□□□□□ -2.15
COL4A1P02462 AL512506.1-201ENST00000613918 449 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC008083.4-201ENST00000615076 444 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A1P02462 AC092608.3-201ENST00000625017 386 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AL133216.2-202ENST00000634512 349 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC068620.4-201ENST00000636730 1182 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC073055.1-201ENST00000456901 1621 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
COL4A1P02462 AC138915.1-201ENST00000565427 1685 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
COL4A1P02462 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A1P02462 AL596028.1-201ENST00000326971 197 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 RNU6-792P-201ENST00000363490 107 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 SNORD114-22-201ENST00000365423 72 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC019070.1-201ENST00000415008 1024 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A1P02462 OFD1P18Y-201ENST00000420889 959 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A1P02462 AC096632.1-201ENST00000427395 310 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms