Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL138885.1-201ENST00000405921 675 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AL513331.1-201ENST00000411908 397 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RPS24P7-201ENST00000416921 246 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RPL22P18-201ENST00000417197 377 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 MTND2P9-201ENST00000422293 931 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 Z80107.1-201ENST00000436830 412 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 Z82210.1-201ENST00000440037 231 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 CYCSP32-201ENST00000440548 321 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RPL7P36-201ENST00000444633 681 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AL671855.1-201ENST00000446875 1203 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 ANKRD26P4-201ENST00000455755 950 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC008481.1-201ENST00000463278 396 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RPS27P26-201ENST00000494583 239 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 OR2A20P-203ENST00000498397 1268 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 CDC42P4-201ENST00000510507 563 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC087373.1-201ENST00000524920 491 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC087241.2-201ENST00000535801 324 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 PRELID2P1-201ENST00000552837 301 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 MIR4446-201ENST00000578505 67 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 MIR5004-201ENST00000579078 107 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC002545.1-201ENST00000592511 181 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC020895.1-201ENST00000595362 272 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 RPL12P50-201ENST00000603116 116 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC007038.2-201ENST00000608095 740 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 TUSC7.1-201ENST00000610969 165 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC068787.1-201ENST00000623908 691 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AL136313.1-201ENST00000624804 202 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 AC000403.1-201ENST00000613696 3585 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.01□□□□□ -2.09
HLA-DQA1P01909 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
HLA-DQA1P01909 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DQA1P01909 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2□□□□□ -2.09
HLA-DQA1P01909 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQA1P01909 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQA1P01909 MIR422A-201ENST00000362286 90 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 RNU6-1214P-201ENST00000363650 109 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 Y_RNA.302-201ENST00000364997 102 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 U8.8-201ENST00000365399 135 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 RNU6-741P-201ENST00000383889 107 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 RNU6-140P-201ENST00000384566 108 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 MIR144-201ENST00000384886 86 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 ANAPC10P1-201ENST00000395991 556 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2□□□□□ -2.09
HLA-DQA1P01909 AC078974.1-201ENST00000411597 223 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DQA1P01909 RPL21P24-201ENST00000413752 448 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 HMGB1P11-201ENST00000413899 637 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DQA1P01909 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DQA1P01909 LARP1BP3-201ENST00000437229 869 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 MTCYBP3-201ENST00000445588 1137 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AL606662.1-201ENST00000445763 553 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 ELOCP30-201ENST00000447108 299 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DQA1P01909 NIPA2P5-201ENST00000452282 464 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 RPL12P25-201ENST00000455592 494 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DQA1P01909 RPS29P20-201ENST00000489592 171 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQA1P01909 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2□□□□□ -2.09
HLA-DQA1P01909 AC138853.1-201ENST00000503549 823 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DQA1P01909 AC008885.1-201ENST00000514930 301 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 RNA5SP341-201ENST00000516261 117 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 SNORA70.24-201ENST00000517233 118 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQA1P01909 AP002404.1-201ENST00000532005 451 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DQA1P01909 AC023050.2-201ENST00000544968 387 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DQA1P01909 AC128657.1-201ENST00000549459 145 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DQA1P01909 H3F3AP1-201ENST00000559984 334 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AC012493.2-201ENST00000595083 291 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 VN1R90P-201ENST00000595717 726 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AC105148.1-201ENST00000604961 409 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 MTND4LP5-201ENST00000605152 292 ntBASIC2□□□□□ -2.09
HLA-DQA1P01909 AL355472.4-201ENST00000610233 626 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms