Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RNU6-600P-201ENST00000362524 99 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
POLR1AO95602 OR51A5P-201ENST00000415429 942 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.54□□□□□ -2.16
POLR1AO95602 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
POLR1AO95602 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.54□□□□□ -2.16
POLR1AO95602 AC022880.1-201ENST00000534017 973 ntBASIC1.54□□□□□ -2.16
POLR1AO95602 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.54□□□□□ -2.16
POLR1AO95602 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
POLR1AO95602 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
POLR1AO95602 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
POLR1AO95602 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.53□□□□□ -2.16
POLR1AO95602 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.53□□□□□ -2.16
POLR1AO95602 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.53□□□□□ -2.16
POLR1AO95602 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.53□□□□□ -2.16
POLR1AO95602 AC211469.2-201ENST00000605461 205 ntBASIC1.53□□□□□ -2.16
POLR1AO95602 RNA5SP457-201ENST00000363657 124 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 RNA5SP354-201ENST00000391247 136 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.52□□□□□ -2.17
POLR1AO95602 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.52□□□□□ -2.17
POLR1AO95602 AC096745.1-201ENST00000509945 370 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.52□□□□□ -2.17
POLR1AO95602 MIR4295-201ENST00000585286 85 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
POLR1AO95602 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
POLR1AO95602 SNORA7.2-201ENST00000364446 145 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 AL691517.1-201ENST00000440833 1235 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 RNA5SP468-201ENST00000516782 93 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.52□□□□□ -2.17
POLR1AO95602 AC105245.1-201ENST00000581934 244 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 FAM106CP-201ENST00000582212 507 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 SNRPGP15-201ENST00000600149 222 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.52□□□□□ -2.17
POLR1AO95602 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.52□□□□□ -2.17
POLR1AO95602 AC006065.5-201ENST00000623427 349 ntBASIC1.52□□□□□ -2.17
POLR1AO95602 MIR532-201ENST00000385025 91 ntBASIC1.51□□□□□ -2.17
POLR1AO95602 AL589994.1-201ENST00000404962 340 ntBASIC1.51□□□□□ -2.17
POLR1AO95602 RNU4-65P-201ENST00000410473 140 ntBASIC1.51□□□□□ -2.17
POLR1AO95602 AC244098.2-201ENST00000422068 99 ntBASIC1.51□□□□□ -2.17
POLR1AO95602 RPS27P1-201ENST00000450552 247 ntBASIC1.51□□□□□ -2.17
POLR1AO95602 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.51□□□□□ -2.17
POLR1AO95602 AC108078.1-201ENST00000508073 725 ntBASIC1.51□□□□□ -2.17
POLR1AO95602 RN7SKP179-201ENST00000516126 217 ntBASIC1.51□□□□□ -2.17
POLR1AO95602 HSPE1P4-201ENST00000550617 308 ntBASIC1.51□□□□□ -2.17
POLR1AO95602 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.51□□□□□ -2.17
POLR1AO95602 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.5□□□□□ -2.17
POLR1AO95602 AC007342.9-201ENST00000623877 1385 ntBASIC1.5□□□□□ -2.17
POLR1AO95602 RNU6-37P-201ENST00000362692 107 ntBASIC1.5□□□□□ -2.17
POLR1AO95602 RNU6-11P-201ENST00000364234 107 ntBASIC1.5□□□□□ -2.17
POLR1AO95602 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.5□□□□□ -2.17
POLR1AO95602 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.5□□□□□ -2.17
POLR1AO95602 NF1P3-201ENST00000457709 450 ntBASIC1.5□□□□□ -2.17
POLR1AO95602 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.5□□□□□ -2.17
POLR1AO95602 CENPUP2-201ENST00000555897 1186 ntBASIC1.5□□□□□ -2.17
POLR1AO95602 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.5□□□□□ -2.17
POLR1AO95602 SNRPEP4-201ENST00000435815 279 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 RPS29P28-201ENST00000446439 141 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 KLRA1P-201ENST00000503499 986 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.49□□□□□ -2.17
POLR1AO95602 MTND2P17-201ENST00000550281 688 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 AL031274.2-201ENST00000599419 203 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 DPRXP5-201ENST00000604662 539 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 AC096772.1-201ENST00000609146 564 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 SNORA14A-201ENST00000364773 135 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 RNU6-716P-201ENST00000365621 103 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
POLR1AO95602 AC096632.1-201ENST00000427395 310 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 RNA5SP476-201ENST00000516613 103 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.49□□□□□ -2.17
POLR1AO95602 AL355816.1-201ENST00000607951 118 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 AP005137.2-201ENST00000609238 400 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 AC091304.6-201ENST00000619761 202 ntBASIC1.49□□□□□ -2.17
POLR1AO95602 AC080100.1-201ENST00000624239 5356 ntBASIC1.48□□□□□ -2.17
POLR1AO95602 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
POLR1AO95602 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
POLR1AO95602 RNU6-1077P-201ENST00000410506 102 ntBASIC1.48□□□□□ -2.17
POLR1AO95602 AL356379.1-201ENST00000414105 126 ntBASIC1.48□□□□□ -2.17
POLR1AO95602 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.48□□□□□ -2.17
POLR1AO95602 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.48□□□□□ -2.17
POLR1AO95602 COX6CP18-201ENST00000448769 222 ntBASIC1.48□□□□□ -2.17
POLR1AO95602 SNORD97-201ENST00000459187 142 ntBASIC1.48□□□□□ -2.17
POLR1AO95602 AC010301.1-201ENST00000473936 355 ntBASIC1.48□□□□□ -2.17
POLR1AO95602 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
POLR1AO95602 RNU6-943P-201ENST00000516960 98 ntBASIC1.48□□□□□ -2.17
POLR1AO95602 SNORA31.20-201ENST00000517111 133 ntBASIC1.48□□□□□ -2.17
POLR1AO95602 AC008269.2-201ENST00000561915 1105 ntBASIC1.48□□□□□ -2.17
POLR1AO95602 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.48□□□□□ -2.17
POLR1AO95602 SNORD114-23-201ENST00000363536 72 ntBASIC1.47□□□□□ -2.17
POLR1AO95602 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
POLR1AO95602 MIR193B-201ENST00000384907 83 ntBASIC1.47□□□□□ -2.17
POLR1AO95602 MTATP6P4-201ENST00000427725 675 ntBASIC1.47□□□□□ -2.17
POLR1AO95602 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.47□□□□□ -2.17
POLR1AO95602 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
POLR1AO95602 AC234775.1-201ENST00000454247 670 ntBASIC1.47□□□□□ -2.17
POLR1AO95602 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.47□□□□□ -2.17
POLR1AO95602 AC092989.1-201ENST00000481235 277 ntBASIC1.47□□□□□ -2.17
POLR1AO95602 AC105313.1-201ENST00000509121 353 ntBASIC1.47□□□□□ -2.17
POLR1AO95602 RNA5SP471-201ENST00000516971 106 ntBASIC1.47□□□□□ -2.17
POLR1AO95602 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms