Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.2□□□□□ -2.22
ABCA1O95477 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.2□□□□□ -2.22
ABCA1O95477 OR10AB1P-201ENST00000609613 938 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 AC140725.3-201ENST00000616193 880 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ABCA1O95477 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.2□□□□□ -2.22
ABCA1O95477 MTND5P31-201ENST00000419366 1374 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.2□□□□□ -2.22
ABCA1O95477 MIR524-201ENST00000385242 87 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 AC092745.2-202ENST00000411880 369 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 MORF4L1P7-201ENST00000426038 703 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 MICF-203ENST00000432679 129 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.2□□□□□ -2.22
ABCA1O95477 AC010099.1-201ENST00000455434 375 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 LTV1P1-201ENST00000510683 1237 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 PRELID3BP4-201ENST00000515476 571 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.2□□□□□ -2.22
ABCA1O95477 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.2□□□□□ -2.22
ABCA1O95477 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.2□□□□□ -2.22
ABCA1O95477 AC095031.1-201ENST00000623685 672 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 MIR6767-201ENST00000637302 66 ntBASIC1.2□□□□□ -2.22
ABCA1O95477 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.2□□□□□ -2.22
ABCA1O95477 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
ABCA1O95477 Y_RNA.178-201ENST00000363832 102 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCA1O95477 RNU6-1072P-201ENST00000384703 107 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 RNU6-443P-201ENST00000384780 107 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 U3.29-201ENST00000391296 212 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 SNRPEP2-201ENST00000397592 279 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 MIR1303-201ENST00000408625 86 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 MIR548J-201ENST00000408833 112 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 UBE2V1P13-201ENST00000436983 439 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCA1O95477 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCA1O95477 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCA1O95477 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCA1O95477 RNU1-104P-201ENST00000517280 175 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCA1O95477 AC087808.1-201ENST00000520501 361 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 GLYCAM1-201ENST00000546596 285 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 AC008015.1-201ENST00000555505 465 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.19□□□□□ -2.22
ABCA1O95477 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCA1O95477 AC027104.1-201ENST00000563702 681 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 AC136443.5-201ENST00000603741 370 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.19□□□□□ -2.22
ABCA1O95477 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCA1O95477 uc_338.20-201ENST00000621563 178 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 AC012640.5-201ENST00000623897 319 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCA1O95477 AL354685.2-201ENST00000448218 1447 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
ABCA1O95477 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCA1O95477 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCA1O95477 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.19□□□□□ -2.22
ABCA1O95477 MIR3117-201ENST00000584034 78 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 HMGB1P51-201ENST00000605166 638 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
ABCA1O95477 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.19□□□□□ -2.22
ABCA1O95477 AC009902.3-201ENST00000606235 2172 ntBASIC1.19□□□□□ -2.22
ABCA1O95477 RNU6-198P-201ENST00000384258 104 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 MIR320A-201ENST00000385302 82 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AL445183.3-201ENST00000414168 502 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.18□□□□□ -2.22
ABCA1O95477 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.18□□□□□ -2.22
ABCA1O95477 snoU13.28-201ENST00000459235 104 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AC090096.1-201ENST00000489168 390 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.18□□□□□ -2.22
ABCA1O95477 MIR514B-201ENST00000516774 80 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
ABCA1O95477 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.18□□□□□ -2.22
ABCA1O95477 AC109446.2-201ENST00000567872 497 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 HSPE1P7-201ENST00000604681 321 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AC013468.1-201ENST00000608680 598 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 UCA1.1-201ENST00000620952 75 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AC024595.1-201ENST00000623088 387 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 MKKS-204ENST00000639674 192 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ABCA1O95477 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
ABCA1O95477 SNORD51-201ENST00000384320 80 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 MIR1304-201ENST00000408243 91 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.18□□□□□ -2.22
ABCA1O95477 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.18□□□□□ -2.22
ABCA1O95477 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ABCA1O95477 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.18□□□□□ -2.22
ABCA1O95477 RPS20P24-201ENST00000457473 361 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ABCA1O95477 MTCYBP18-201ENST00000501056 747 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.18□□□□□ -2.22
ABCA1O95477 AC093281.2-201ENST00000510153 597 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.18□□□□□ -2.22
ABCA1O95477 MRPS36P2-201ENST00000512569 299 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 EEF1B2P4-201ENST00000551398 348 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 FAM106DP-201ENST00000586416 501 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AP001330.4-201ENST00000604350 154 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 NUTF2P8-201ENST00000604593 363 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AC106900.2-201ENST00000604994 317 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 AC090116.1-201ENST00000615679 446 ntBASIC1.18□□□□□ -2.22
ABCA1O95477 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms