Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MIR3921-201ENST00000577308 85 ntBASIC1.11□□□□□ -2.23
SIX6O95475 BNIP3P33-201ENST00000598912 569 ntBASIC1.11□□□□□ -2.23
SIX6O95475 AC243960.4-201ENST00000600532 288 ntBASIC1.11□□□□□ -2.23
SIX6O95475 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.11□□□□□ -2.23
SIX6O95475 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SIX6O95475 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
SIX6O95475 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SIX6O95475 RNU4-13P-201ENST00000364019 141 ntBASIC1.1□□□□□ -2.23
SIX6O95475 RNU6-444P-201ENST00000383988 108 ntBASIC1.1□□□□□ -2.23
SIX6O95475 RNU6-203P-201ENST00000384038 104 ntBASIC1.1□□□□□ -2.23
SIX6O95475 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SIX6O95475 NPM1P10-201ENST00000398310 865 ntBASIC1.1□□□□□ -2.23
SIX6O95475 MIR934-201ENST00000401241 83 ntBASIC1.1□□□□□ -2.23
SIX6O95475 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.1□□□□□ -2.23
SIX6O95475 HMGB1P9-201ENST00000429856 646 ntBASIC1.1□□□□□ -2.23
SIX6O95475 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SIX6O95475 AL512844.2-201ENST00000433990 593 ntBASIC1.1□□□□□ -2.23
SIX6O95475 RPL7P36-201ENST00000444633 681 ntBASIC1.1□□□□□ -2.23
SIX6O95475 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.1□□□□□ -2.23
SIX6O95475 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.1□□□□□ -2.23
SIX6O95475 AC008549.1-201ENST00000512900 643 ntBASIC1.1□□□□□ -2.23
SIX6O95475 AC022447.1-201ENST00000515358 464 ntBASIC1.1□□□□□ -2.23
SIX6O95475 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
SIX6O95475 AC024224.1-201ENST00000538284 609 ntBASIC1.1□□□□□ -2.23
SIX6O95475 AC087465.1-201ENST00000560574 245 ntBASIC1.1□□□□□ -2.23
SIX6O95475 AC004775.1-201ENST00000607389 753 ntBASIC1.1□□□□□ -2.23
SIX6O95475 AC007038.2-201ENST00000608095 740 ntBASIC1.1□□□□□ -2.23
SIX6O95475 AC010678.1-201ENST00000614118 713 ntBASIC1.1□□□□□ -2.23
SIX6O95475 AC021755.4-201ENST00000616620 456 ntBASIC1.1□□□□□ -2.23
SIX6O95475 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.1□□□□□ -2.23
SIX6O95475 IGHVIII-44-202ENST00000636235 289 ntBASIC1.1□□□□□ -2.23
SIX6O95475 U6.107-201ENST00000637108 79 ntBASIC1.1□□□□□ -2.23
SIX6O95475 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
SIX6O95475 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SIX6O95475 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SIX6O95475 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.09□□□□□ -2.23
SIX6O95475 DEFB108F-201ENST00000344638 222 ntBASIC1.09□□□□□ -2.23
SIX6O95475 MIR126-201ENST00000362291 85 ntBASIC1.09□□□□□ -2.23
SIX6O95475 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SIX6O95475 MIR325-201ENST00000385260 98 ntBASIC1.09□□□□□ -2.23
SIX6O95475 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SIX6O95475 RNU6-272P-201ENST00000411028 104 ntBASIC1.09□□□□□ -2.23
SIX6O95475 VN1R36P-201ENST00000414936 291 ntBASIC1.09□□□□□ -2.23
SIX6O95475 MTND5P25-201ENST00000430499 799 ntBASIC1.09□□□□□ -2.23
SIX6O95475 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.09□□□□□ -2.23
SIX6O95475 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.09□□□□□ -2.23
SIX6O95475 DNAJC19P4-201ENST00000440115 345 ntBASIC1.09□□□□□ -2.23
SIX6O95475 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.09□□□□□ -2.23
SIX6O95475 AC007677.1-201ENST00000445757 515 ntBASIC1.09□□□□□ -2.23
SIX6O95475 DDX3P2-201ENST00000446138 111 ntBASIC1.09□□□□□ -2.23
SIX6O95475 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.09□□□□□ -2.23
SIX6O95475 RPS29P29-201ENST00000456396 171 ntBASIC1.09□□□□□ -2.23
SIX6O95475 RPS15AP36-201ENST00000492022 382 ntBASIC1.09□□□□□ -2.23
SIX6O95475 SUMO1P1-201ENST00000497904 306 ntBASIC1.09□□□□□ -2.23
SIX6O95475 SLC25A15P5-201ENST00000508033 253 ntBASIC1.09□□□□□ -2.23
SIX6O95475 AP003033.1-201ENST00000527244 415 ntBASIC1.09□□□□□ -2.23
SIX6O95475 DEFB108D-201ENST00000527787 222 ntBASIC1.09□□□□□ -2.23
SIX6O95475 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SIX6O95475 EEF1B2P4-201ENST00000551398 348 ntBASIC1.09□□□□□ -2.23
SIX6O95475 AL133241.1-201ENST00000556832 487 ntBASIC1.09□□□□□ -2.23
SIX6O95475 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SIX6O95475 CBX3P2-202ENST00000583365 535 ntBASIC1.09□□□□□ -2.23
SIX6O95475 AL021997.1-201ENST00000605757 193 ntBASIC1.09□□□□□ -2.23
SIX6O95475 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.09□□□□□ -2.23
SIX6O95475 AL592148.2-201ENST00000612210 372 ntBASIC1.09□□□□□ -2.23
SIX6O95475 AC068722.2-201ENST00000618734 544 ntBASIC1.09□□□□□ -2.23
SIX6O95475 AL109659.3-201ENST00000624985 950 ntBASIC1.09□□□□□ -2.23
SIX6O95475 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.09□□□□□ -2.23
SIX6O95475 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
SIX6O95475 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
SIX6O95475 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SIX6O95475 MIR218-1-201ENST00000384999 110 ntBASIC1.08□□□□□ -2.24
SIX6O95475 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
SIX6O95475 MIR1290-201ENST00000408735 78 ntBASIC1.08□□□□□ -2.24
SIX6O95475 VTA1P1-201ENST00000414044 866 ntBASIC1.08□□□□□ -2.24
SIX6O95475 LINC01347-201ENST00000417964 355 ntBASIC1.08□□□□□ -2.24
SIX6O95475 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.08□□□□□ -2.24
SIX6O95475 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.08□□□□□ -2.24
SIX6O95475 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.08□□□□□ -2.24
SIX6O95475 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.08□□□□□ -2.24
SIX6O95475 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.08□□□□□ -2.24
SIX6O95475 RAC1P7-201ENST00000445367 377 ntBASIC1.08□□□□□ -2.24
SIX6O95475 HMGN2P10-201ENST00000448085 265 ntBASIC1.08□□□□□ -2.24
SIX6O95475 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.08□□□□□ -2.24
SIX6O95475 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.08□□□□□ -2.24
SIX6O95475 VPS26AP1-201ENST00000483197 979 ntBASIC1.08□□□□□ -2.24
SIX6O95475 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.08□□□□□ -2.24
SIX6O95475 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.08□□□□□ -2.24
SIX6O95475 AC017037.2-201ENST00000513850 890 ntBASIC1.08□□□□□ -2.24
SIX6O95475 SNORA31.24-201ENST00000517232 57 ntBASIC1.08□□□□□ -2.24
SIX6O95475 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.08□□□□□ -2.24
SIX6O95475 AC010738.1-201ENST00000604970 987 ntBASIC1.08□□□□□ -2.24
SIX6O95475 AC009318.2-201ENST00000610917 651 ntBASIC1.08□□□□□ -2.24
SIX6O95475 AP003400.5-201ENST00000624827 617 ntBASIC1.08□□□□□ -2.24
SIX6O95475 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
SIX6O95475 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
SIX6O95475 ZNF72P-201ENST00000425869 1908 ntBASIC1.07□□□□□ -2.24
SIX6O95475 RNU6-1083P-201ENST00000384022 107 ntBASIC1.07□□□□□ -2.24
SIX6O95475 RNU6-882P-201ENST00000391025 103 ntBASIC1.07□□□□□ -2.24
SIX6O95475 SNORA67.6-201ENST00000391093 99 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms