Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.45□□□□□ -2.02
BRD4O60885 AC111188.2-201ENST00000529697 1387 ntBASIC2.44□□□□□ -2.02
BRD4O60885 ENSAP3-201ENST00000312710 333 ntBASIC2.44□□□□□ -2.02
BRD4O60885 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
BRD4O60885 MIR649-201ENST00000384843 97 ntBASIC2.44□□□□□ -2.02
BRD4O60885 HMGN2P38-201ENST00000423806 265 ntBASIC2.44□□□□□ -2.02
BRD4O60885 HMGN2P19-201ENST00000425149 265 ntBASIC2.44□□□□□ -2.02
BRD4O60885 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.44□□□□□ -2.02
BRD4O60885 AL691517.1-201ENST00000440833 1235 ntBASIC2.44□□□□□ -2.02
BRD4O60885 USP9YP15-201ENST00000442391 422 ntBASIC2.44□□□□□ -2.02
BRD4O60885 TPRKBP1-201ENST00000456243 481 ntBASIC2.44□□□□□ -2.02
BRD4O60885 AC097493.1-201ENST00000463958 372 ntBASIC2.44□□□□□ -2.02
BRD4O60885 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.44□□□□□ -2.02
BRD4O60885 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.44□□□□□ -2.02
BRD4O60885 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.44□□□□□ -2.02
BRD4O60885 AC025918.2-201ENST00000558683 763 ntBASIC2.44□□□□□ -2.02
BRD4O60885 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.44□□□□□ -2.02
BRD4O60885 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.44□□□□□ -2.02
BRD4O60885 AC233266.2-201ENST00000567067 528 ntBASIC2.44□□□□□ -2.02
BRD4O60885 MIR4303-201ENST00000581299 66 ntBASIC2.44□□□□□ -2.02
BRD4O60885 AC012443.1-201ENST00000605605 231 ntBASIC2.44□□□□□ -2.02
BRD4O60885 AC112503.2-201ENST00000609005 552 ntBASIC2.44□□□□□ -2.02
BRD4O60885 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.44□□□□□ -2.02
BRD4O60885 MIR1264-201ENST00000616374 69 ntBASIC2.44□□□□□ -2.02
BRD4O60885 AL353748.2-201ENST00000622148 471 ntBASIC2.44□□□□□ -2.02
BRD4O60885 AC090617.9-201ENST00000623751 147 ntBASIC2.44□□□□□ -2.02
BRD4O60885 HPVC1-201ENST00000629899 1198 ntBASIC2.44□□□□□ -2.02
BRD4O60885 AC083865.1-201ENST00000636634 831 ntBASIC2.44□□□□□ -2.02
BRD4O60885 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
BRD4O60885 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
BRD4O60885 AL596028.1-201ENST00000326971 197 ntBASIC2.43□□□□□ -2.02
BRD4O60885 SNORD48-201ENST00000364953 64 ntBASIC2.43□□□□□ -2.02
BRD4O60885 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
BRD4O60885 MIR1290-201ENST00000408735 78 ntBASIC2.43□□□□□ -2.02
BRD4O60885 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.43□□□□□ -2.02
BRD4O60885 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.43□□□□□ -2.02
BRD4O60885 DNAJC19P4-201ENST00000440115 345 ntBASIC2.43□□□□□ -2.02
BRD4O60885 MTND2P3-201ENST00000452458 470 ntBASIC2.43□□□□□ -2.02
BRD4O60885 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.43□□□□□ -2.02
BRD4O60885 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.43□□□□□ -2.02
BRD4O60885 RPS27P21-201ENST00000486977 252 ntBASIC2.43□□□□□ -2.02
BRD4O60885 RPS27P23-201ENST00000487608 251 ntBASIC2.43□□□□□ -2.02
BRD4O60885 RN7SL274P-201ENST00000492268 272 ntBASIC2.43□□□□□ -2.02
BRD4O60885 RPL30P5-201ENST00000494923 336 ntBASIC2.43□□□□□ -2.02
BRD4O60885 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
BRD4O60885 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.43□□□□□ -2.02
BRD4O60885 MIR514B-201ENST00000516774 80 ntBASIC2.43□□□□□ -2.02
BRD4O60885 HIGD1AP6-201ENST00000521833 279 ntBASIC2.43□□□□□ -2.02
BRD4O60885 NDUFA5P6-201ENST00000542110 379 ntBASIC2.43□□□□□ -2.02
BRD4O60885 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.43□□□□□ -2.02
BRD4O60885 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.43□□□□□ -2.02
BRD4O60885 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.43□□□□□ -2.02
BRD4O60885 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.43□□□□□ -2.02
BRD4O60885 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.43□□□□□ -2.02
BRD4O60885 AC040168.1-201ENST00000623594 991 ntBASIC2.43□□□□□ -2.02
BRD4O60885 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.43□□□□□ -2.02
BRD4O60885 AP003399.1-201ENST00000637534 361 ntBASIC2.43□□□□□ -2.02
BRD4O60885 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.43□□□□□ -2.02
BRD4O60885 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.42□□□□□ -2.02
BRD4O60885 AL589826.1-201ENST00000340697 249 ntBASIC2.42□□□□□ -2.02
BRD4O60885 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
BRD4O60885 U3.20-201ENST00000390909 217 ntBASIC2.42□□□□□ -2.02
BRD4O60885 U3.40-201ENST00000408706 208 ntBASIC2.42□□□□□ -2.02
BRD4O60885 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.42□□□□□ -2.02
BRD4O60885 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.42□□□□□ -2.02
BRD4O60885 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.42□□□□□ -2.02
BRD4O60885 AC007000.2-201ENST00000442564 487 ntBASIC2.42□□□□□ -2.02
BRD4O60885 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.42□□□□□ -2.02
BRD4O60885 CDC42P1-201ENST00000456658 548 ntBASIC2.42□□□□□ -2.02
BRD4O60885 snoU109.4-201ENST00000458953 143 ntBASIC2.42□□□□□ -2.02
BRD4O60885 VPS26AP1-201ENST00000483197 979 ntBASIC2.42□□□□□ -2.02
BRD4O60885 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.42□□□□□ -2.02
BRD4O60885 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.42□□□□□ -2.02
BRD4O60885 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.42□□□□□ -2.02
BRD4O60885 AC074051.3-201ENST00000570238 358 ntBASIC2.42□□□□□ -2.02
BRD4O60885 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.42□□□□□ -2.02
BRD4O60885 AC040174.2-201ENST00000602701 465 ntBASIC2.42□□□□□ -2.02
BRD4O60885 OR4H6P-202ENST00000603819 340 ntBASIC2.42□□□□□ -2.02
BRD4O60885 AC135507.1-201ENST00000607214 561 ntBASIC2.42□□□□□ -2.02
BRD4O60885 AC107214.2-201ENST00000608204 634 ntBASIC2.42□□□□□ -2.02
BRD4O60885 AC003001.2-201ENST00000616294 831 ntBASIC2.42□□□□□ -2.02
BRD4O60885 AC009090.3-201ENST00000616553 565 ntBASIC2.42□□□□□ -2.02
BRD4O60885 uc_338.20-201ENST00000621563 178 ntBASIC2.42□□□□□ -2.02
BRD4O60885 AP003400.6-201ENST00000624698 740 ntBASIC2.42□□□□□ -2.02
BRD4O60885 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.42□□□□□ -2.02
BRD4O60885 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
BRD4O60885 SEC63P2-201ENST00000503863 1939 ntBASIC2.41□□□□□ -2.02
BRD4O60885 AC080100.1-201ENST00000624239 5356 ntBASIC2.41□□□□□ -2.02
BRD4O60885 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.41□□□□□ -2.02
BRD4O60885 RSL24D1P8-201ENST00000434442 492 ntBASIC2.41□□□□□ -2.02
BRD4O60885 MTND4LP10-201ENST00000435146 291 ntBASIC2.41□□□□□ -2.02
BRD4O60885 AC090774.1-201ENST00000435925 246 ntBASIC2.41□□□□□ -2.02
BRD4O60885 MOB1AP2-201ENST00000446060 614 ntBASIC2.41□□□□□ -2.02
BRD4O60885 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.41□□□□□ -2.02
BRD4O60885 PSPHP1-201ENST00000450062 261 ntBASIC2.41□□□□□ -2.02
BRD4O60885 AC068781.1-201ENST00000488231 618 ntBASIC2.41□□□□□ -2.02
BRD4O60885 MTCO2P9-201ENST00000503214 694 ntBASIC2.41□□□□□ -2.02
BRD4O60885 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.41□□□□□ -2.02
BRD4O60885 AC104108.1-201ENST00000509930 412 ntBASIC2.41□□□□□ -2.02
BRD4O60885 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms