Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 BNIP3P2-201ENST00000441221 577 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.41□□□□□ -2.02
CHMP2AO43633 MTCYBP42-201ENST00000444653 1130 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 RPL30P9-201ENST00000465586 330 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 RNU6-1261P-201ENST00000517194 104 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.41□□□□□ -2.02
CHMP2AO43633 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.41□□□□□ -2.02
CHMP2AO43633 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.41□□□□□ -2.02
CHMP2AO43633 AC125611.1-201ENST00000549563 229 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 AL132857.1-201ENST00000555180 708 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.41□□□□□ -2.02
CHMP2AO43633 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 AL590099.1-201ENST00000615276 138 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.41□□□□□ -2.02
CHMP2AO43633 AP000943.4-201ENST00000622912 357 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.41□□□□□ -2.02
CHMP2AO43633 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CHMP2AO43633 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHMP2AO43633 AP005901.5-201ENST00000545779 1796 ntBASIC2.41□□□□□ -2.02
CHMP2AO43633 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.41□□□□□ -2.02
CHMP2AO43633 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CHMP2AO43633 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.4□□□□□ -2.02
CHMP2AO43633 Y_RNA.25-201ENST00000362528 102 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
CHMP2AO43633 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP2AO43633 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP2AO43633 MTCO1P3-201ENST00000429327 192 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AC007919.1-201ENST00000429380 217 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP2AO43633 AL513124.1-201ENST00000450410 614 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP2AO43633 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.4□□□□□ -2.03
CHMP2AO43633 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP2AO43633 AP1S2P1-201ENST00000457344 379 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 MRPS17P3-201ENST00000465453 385 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AC090453.1-201ENST00000495560 436 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AC105252.1-201ENST00000503089 286 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AC022447.3-201ENST00000506865 495 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 RN7SKP31-201ENST00000516354 278 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 RNA5SP82-201ENST00000516707 92 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP2AO43633 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.4□□□□□ -2.03
CHMP2AO43633 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.4□□□□□ -2.03
CHMP2AO43633 TPMTP1-201ENST00000592307 737 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.4□□□□□ -2.03
CHMP2AO43633 AP002802.2-201ENST00000605877 235 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AC116312.1-201ENST00000606841 314 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AC080013.4-201ENST00000607624 649 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AC104237.2-201ENST00000612456 443 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.03
CHMP2AO43633 AL157770.1-201ENST00000623049 439 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AL138960.2-201ENST00000625145 535 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.4□□□□□ -2.03
CHMP2AO43633 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
CHMP2AO43633 AC009902.3-201ENST00000606235 2172 ntBASIC2.4□□□□□ -2.03
CHMP2AO43633 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CHMP2AO43633 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.39□□□□□ -2.03
CHMP2AO43633 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHMP2AO43633 MIRLET7G-201ENST00000362280 84 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.39□□□□□ -2.03
CHMP2AO43633 Y_RNA.578-201ENST00000390903 88 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 RNU6-1328P-201ENST00000410938 106 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.39□□□□□ -2.03
CHMP2AO43633 AC008850.1-201ENST00000427546 362 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP2AO43633 Z98742.2-201ENST00000431564 187 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 PIGFP3-201ENST00000441918 722 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP2AO43633 RBM43P1-201ENST00000476891 1081 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP2AO43633 RPS29P20-201ENST00000489592 171 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP2AO43633 NDUFB4P2-201ENST00000509515 391 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 RNU6-528P-201ENST00000516926 100 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 SNORA31.18-201ENST00000517043 134 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.39□□□□□ -2.03
CHMP2AO43633 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP2AO43633 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP2AO43633 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.39□□□□□ -2.03
CHMP2AO43633 AL136981.2-201ENST00000617319 734 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 AL603758.1-201ENST00000618654 241 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.39□□□□□ -2.03
CHMP2AO43633 MIR1322-201ENST00000638013 71 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 MKKS-204ENST00000639674 192 ntBASIC2.39□□□□□ -2.03
CHMP2AO43633 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CHMP2AO43633 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.38□□□□□ -2.03
CHMP2AO43633 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.38□□□□□ -2.03
CHMP2AO43633 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 MTCO1P9-201ENST00000505577 1534 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHMP2AO43633 snoZ40.1-201ENST00000364540 72 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 RN7SKP226-201ENST00000364912 300 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 RNU1-52P-201ENST00000384190 164 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 RNU6-298P-201ENST00000390888 96 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 RNU2-49P-201ENST00000410666 184 ntBASIC2.38□□□□□ -2.03
CHMP2AO43633 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms