Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 MIR199A2-201ENST00000385289 110 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
FOXN1O15353 RNU6-952P-201ENST00000391164 108 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN1O15353 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN1O15353 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN1O15353 RNU2-9P-201ENST00000410194 145 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 RNU2-62P-201ENST00000410868 191 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 NDUFB4P5-201ENST00000415445 361 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 NCOR1P3-201ENST00000420479 303 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 RPL21P109-201ENST00000422213 475 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN1O15353 Z82205.1-201ENST00000428456 297 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 GTF2IP13-201ENST00000438487 386 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.3□□□□□ -1.72
FOXN1O15353 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN1O15353 Y_RNA.639-201ENST00000458981 102 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 Y_RNA.631-201ENST00000459607 101 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN1O15353 AC027575.1-201ENST00000481064 460 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AL163540.1-201ENST00000485382 386 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AC090096.1-201ENST00000489168 390 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXN1O15353 RNU4-49P-201ENST00000516080 140 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 SNORD60.2-201ENST00000516883 86 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 RNU6-201P-201ENST00000517100 61 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AL389895.1-201ENST00000554127 252 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 MIR4769-201ENST00000584126 77 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXN1O15353 AC021646.1-201ENST00000605469 484 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AC103710.3-201ENST00000608157 948 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AC116447.1-201ENST00000613153 453 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AC007792.1-201ENST00000623023 402 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 AC010149.2-201ENST00000637608 315 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXN1O15353 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN1O15353 AC093535.2-201ENST00000624769 2326 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN1O15353 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
FOXN1O15353 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN1O15353 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
FOXN1O15353 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
FOXN1O15353 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXN1O15353 AC027287.1-201ENST00000553115 1453 ntBASIC4.3□□□□□ -1.72
FOXN1O15353 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXN1O15353 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXN1O15353 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN1O15353 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN1O15353 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN1O15353 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN1O15353 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
FOXN1O15353 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXN1O15353 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
FOXN1O15353 AC007685.1-201ENST00000329806 452 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 Y_RNA.133-201ENST00000363428 110 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 HLFP1-201ENST00000402375 499 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 BTBD10P2-201ENST00000404779 676 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXN1O15353 AC019097.1-201ENST00000424783 735 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXN1O15353 AL158071.1-201ENST00000430315 461 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXN1O15353 RNU6-329P-201ENST00000459618 107 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 MRPS17P3-201ENST00000465453 385 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXN1O15353 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN1O15353 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXN1O15353 Y_RNA.711-201ENST00000516993 102 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 AC022861.1-201ENST00000522981 663 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.29□□□□□ -1.72
FOXN1O15353 AL121576.1-201ENST00000556055 276 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXN1O15353 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXN1O15353 MIR5004-201ENST00000579078 107 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 AC115085.1-201ENST00000588924 229 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 Z84480.1-201ENST00000605131 311 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 AL355816.1-201ENST00000607951 118 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXN1O15353 AC123768.4-201ENST00000616244 701 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 AL078596.1-201ENST00000624856 447 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXN1O15353 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN1O15353 RIOK3P1-201ENST00000418778 1528 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN1O15353 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXN1O15353 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXN1O15353 AC134882.1-201ENST00000603738 1676 ntBASIC4.29□□□□□ -1.72
FOXN1O15353 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN1O15353 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN1O15353 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXN1O15353 AL512646.1-201ENST00000269395 1077 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FOXN1O15353 MT-TR-201ENST00000387439 65 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
FOXN1O15353 AL591416.1-201ENST00000404015 867 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 HSPE1P8-201ENST00000406997 288 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 BX323014.1-201ENST00000412876 237 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AC245054.2-201ENST00000415639 319 ntBASIC4.28□□□□□ -1.72
FOXN1O15353 AC009161.1-201ENST00000417306 376 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms