Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 RNU6-479P-201ENST00000516348 105 ntBASIC7.17□□□□□ -1.26
VGFO15240 RNU2-31P-201ENST00000516954 155 ntBASIC7.17□□□□□ -1.26
VGFO15240 FTH1P11-201ENST00000517577 551 ntBASIC7.17□□□□□ -1.26
VGFO15240 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC7.17□□□□□ -1.26
VGFO15240 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC7.17□□□□□ -1.26
VGFO15240 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC7.17□□□□□ -1.26
VGFO15240 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC7.17□□□□□ -1.26
VGFO15240 MIR6133-201ENST00000617057 108 ntBASIC7.17□□□□□ -1.26
VGFO15240 SCARNA15-201ENST00000607520 4325 ntBASIC7.17□□□□□ -1.26
VGFO15240 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VGFO15240 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
VGFO15240 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
VGFO15240 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
VGFO15240 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VGFO15240 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC7.17□□□□□ -1.26
VGFO15240 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VGFO15240 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VGFO15240 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.16□□□□□ -1.26
VGFO15240 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
VGFO15240 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
VGFO15240 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
VGFO15240 AC008725.1-201ENST00000605123 2263 ntBASIC7.16□□□□□ -1.26
VGFO15240 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
VGFO15240 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VGFO15240 RNU6-417P-201ENST00000384712 107 ntBASIC7.16□□□□□ -1.26
VGFO15240 SNORA48.4-201ENST00000391089 134 ntBASIC7.16□□□□□ -1.26
VGFO15240 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VGFO15240 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC7.16□□□□□ -1.26
VGFO15240 RPL21P40-201ENST00000428586 483 ntBASIC7.16□□□□□ -1.26
VGFO15240 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC7.16□□□□□ -1.26
VGFO15240 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC7.16□□□□□ -1.26
VGFO15240 AL356981.1-201ENST00000454879 684 ntBASIC7.16□□□□□ -1.26
VGFO15240 AURKAPS2-201ENST00000454983 333 ntBASIC7.16□□□□□ -1.26
VGFO15240 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC7.16□□□□□ -1.26
VGFO15240 RN7SL197P-201ENST00000466981 299 ntBASIC7.16□□□□□ -1.26
VGFO15240 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC7.16□□□□□ -1.26
VGFO15240 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
VGFO15240 AK3P2-201ENST00000507976 429 ntBASIC7.16□□□□□ -1.26
VGFO15240 AC010632.3-201ENST00000611377 369 ntBASIC7.16□□□□□ -1.26
VGFO15240 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VGFO15240 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC7.16□□□□□ -1.26
VGFO15240 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VGFO15240 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VGFO15240 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VGFO15240 NCAPGP1-201ENST00000505112 1814 ntBASIC7.15□□□□□ -1.26
VGFO15240 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
VGFO15240 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.15□□□□□ -1.26
VGFO15240 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VGFO15240 Y_RNA.33-201ENST00000362591 102 ntBASIC7.15□□□□□ -1.26
VGFO15240 RNA5SP223-201ENST00000365174 120 ntBASIC7.15□□□□□ -1.26
VGFO15240 RNU6-76P-201ENST00000384060 104 ntBASIC7.15□□□□□ -1.26
VGFO15240 SNORD63-201ENST00000384262 68 ntBASIC7.15□□□□□ -1.26
VGFO15240 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
VGFO15240 RNU6-1154P-201ENST00000391001 104 ntBASIC7.15□□□□□ -1.26
VGFO15240 RNU2-61P-201ENST00000411069 191 ntBASIC7.15□□□□□ -1.26
VGFO15240 RPS27AP12-201ENST00000429552 465 ntBASIC7.15□□□□□ -1.26
VGFO15240 AC068287.1-201ENST00000430283 295 ntBASIC7.15□□□□□ -1.26
VGFO15240 AC138761.5-201ENST00000433967 325 ntBASIC7.15□□□□□ -1.26
VGFO15240 AL031659.1-201ENST00000447075 539 ntBASIC7.15□□□□□ -1.26
VGFO15240 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.15□□□□□ -1.26
VGFO15240 SNORA31.18-201ENST00000517043 134 ntBASIC7.15□□□□□ -1.26
VGFO15240 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC7.15□□□□□ -1.26
VGFO15240 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC7.15□□□□□ -1.26
VGFO15240 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC7.15□□□□□ -1.26
VGFO15240 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VGFO15240 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
VGFO15240 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC7.15□□□□□ -1.27
VGFO15240 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
VGFO15240 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VGFO15240 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.14□□□□□ -1.27
VGFO15240 AC126755.2-208ENST00000327792 462 ntBASIC7.14□□□□□ -1.27
VGFO15240 AC138969.1-213ENST00000331436 462 ntBASIC7.14□□□□□ -1.27
VGFO15240 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VGFO15240 RNA5SP52-201ENST00000362448 134 ntBASIC7.14□□□□□ -1.27
VGFO15240 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
VGFO15240 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC7.14□□□□□ -1.27
VGFO15240 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC7.14□□□□□ -1.27
VGFO15240 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC7.14□□□□□ -1.27
VGFO15240 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC7.14□□□□□ -1.27
VGFO15240 MTCO1P5-201ENST00000433573 344 ntBASIC7.14□□□□□ -1.27
VGFO15240 RPL19P16-201ENST00000433839 588 ntBASIC7.14□□□□□ -1.27
VGFO15240 RPS20P1-201ENST00000434853 354 ntBASIC7.14□□□□□ -1.27
VGFO15240 AC010326.1-201ENST00000462726 602 ntBASIC7.14□□□□□ -1.27
VGFO15240 RN7SL354P-201ENST00000469282 294 ntBASIC7.14□□□□□ -1.27
VGFO15240 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
VGFO15240 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC7.14□□□□□ -1.27
VGFO15240 MIR5096-201ENST00000583713 70 ntBASIC7.14□□□□□ -1.27
VGFO15240 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC7.14□□□□□ -1.27
VGFO15240 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VGFO15240 CR381572.2-201ENST00000624852 397 ntBASIC7.14□□□□□ -1.27
VGFO15240 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VGFO15240 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
VGFO15240 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC7.14□□□□□ -1.27
VGFO15240 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.13□□□□□ -1.27
VGFO15240 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VGFO15240 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC7.13□□□□□ -1.27
VGFO15240 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
VGFO15240 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
VGFO15240 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
VGFO15240 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms