Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATP2A1O14983 HMGN2P20-201ENST00000437531 273 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.47□□□□□ -1.85
ATP2A1O14983 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.47□□□□□ -1.85
ATP2A1O14983 RPL17P49-201ENST00000443728 411 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.47□□□□□ -1.85
ATP2A1O14983 MTCO2P7-201ENST00000446518 666 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.47□□□□□ -1.85
ATP2A1O14983 RNU7-59P-201ENST00000459101 61 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.47□□□□□ -1.85
ATP2A1O14983 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.47□□□□□ -1.85
ATP2A1O14983 LARP1BP2-201ENST00000486594 519 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 VN1R104P-201ENST00000505115 1009 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 ARL2BPP4-201ENST00000506854 471 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 RN7SKP272-201ENST00000516988 232 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.47□□□□□ -1.85
ATP2A1O14983 DEFB108D-201ENST00000527787 222 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.47□□□□□ -1.85
ATP2A1O14983 AP002963.1-201ENST00000530590 184 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 AP003122.4-201ENST00000530980 758 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.47□□□□□ -1.85
ATP2A1O14983 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.47□□□□□ -1.85
ATP2A1O14983 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.47□□□□□ -1.85
ATP2A1O14983 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.47□□□□□ -1.85
ATP2A1O14983 AL133153.1-201ENST00000557756 303 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATP2A1O14983 SEPT7P9-203ENST00000604116 343 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 RNU6-87P-201ENST00000607561 108 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 AC108747.1-201ENST00000609508 535 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 BX664608.1-201ENST00000610519 487 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
ATP2A1O14983 AC019226.1-201ENST00000625666 515 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 AC096644.4-201ENST00000563417 2912 ntBASIC3.47□□□□□ -1.85
ATP2A1O14983 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.85
ATP2A1O14983 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.46□□□□□ -1.86
ATP2A1O14983 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATP2A1O14983 Y_RNA.436-201ENST00000384097 102 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 SNORA75-201ENST00000384158 137 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 EI24P2-201ENST00000397776 1076 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 RNA5SP293-201ENST00000410527 113 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 RPS3AP3-201ENST00000411933 242 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AC006366.1-201ENST00000422002 759 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.46□□□□□ -1.86
ATP2A1O14983 USP9YP36-201ENST00000424581 829 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.46□□□□□ -1.86
ATP2A1O14983 RPL23AP22-201ENST00000437556 453 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AL022238.1-201ENST00000442557 355 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AL135938.1-201ENST00000443141 297 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 MTND6P13-201ENST00000443510 523 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.46□□□□□ -1.86
ATP2A1O14983 AC108059.3-201ENST00000456388 214 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 RPS27P29-201ENST00000463110 252 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 UBE2DNL-203ENST00000474922 222 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AC004924.1-201ENST00000480160 781 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AC135721.1-201ENST00000497954 479 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.46□□□□□ -1.86
ATP2A1O14983 AC079140.3-201ENST00000511111 550 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ATP2A1O14983 MTND3P5-201ENST00000512798 333 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 SNORA31.8-201ENST00000516327 108 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.46□□□□□ -1.86
ATP2A1O14983 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.46□□□□□ -1.86
ATP2A1O14983 AL845331.3-202ENST00000562856 261 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 MIR4672-201ENST00000583126 81 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 MIR3611-201ENST00000584484 83 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 HMGN1P30-201ENST00000589286 268 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.46□□□□□ -1.86
ATP2A1O14983 AP001330.4-201ENST00000604350 154 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AC008250.2-201ENST00000615261 205 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AP001506.1-201ENST00000615444 211 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 AC092656.1-203ENST00000624134 423 ntBASIC3.46□□□□□ -1.86
ATP2A1O14983 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATP2A1O14983 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATP2A1O14983 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.46□□□□□ -1.86
ATP2A1O14983 AC005832.2-201ENST00000538921 1430 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
ATP2A1O14983 OR5J1P-201ENST00000313544 939 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 SNORD56.3-201ENST00000363507 71 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.45□□□□□ -1.86
ATP2A1O14983 RNU6-76P-201ENST00000384060 104 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 AL109755.1-201ENST00000401791 649 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 RNU6-248P-201ENST00000410720 107 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 CDK8P2-201ENST00000415020 547 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 RPL32P35-201ENST00000415214 394 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 SPA17P1-201ENST00000416656 452 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 AL139281.1-201ENST00000422120 335 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.45□□□□□ -1.86
ATP2A1O14983 TIMM9P1-201ENST00000436122 256 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 HIGD1AP11-201ENST00000438361 280 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.45□□□□□ -1.86
ATP2A1O14983 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.45□□□□□ -1.86
ATP2A1O14983 RPL26P6-201ENST00000440913 438 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 AL162389.1-201ENST00000449233 177 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.45□□□□□ -1.86
ATP2A1O14983 MTND1P27-201ENST00000451117 902 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.45□□□□□ -1.86
ATP2A1O14983 AC108860.1-201ENST00000484521 383 ntBASIC3.45□□□□□ -1.86
ATP2A1O14983 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.45□□□□□ -1.86
ATP2A1O14983 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.45□□□□□ -1.86
ATP2A1O14983 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms