Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM38O00635 SNORA11.1-201ENST00000408133 129 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 RNA5SP129-201ENST00000410276 118 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 RPL21P24-201ENST00000413752 448 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM38O00635 AC093578.1-201ENST00000415219 368 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM38O00635 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM38O00635 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM38O00635 AL513185.2-201ENST00000425543 193 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 YME1L1P1-201ENST00000429435 297 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM38O00635 AL136380.1-201ENST00000447970 162 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM38O00635 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM38O00635 RPL39P36-201ENST00000490784 156 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 RPL29P14-201ENST00000495837 428 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AC010587.1-201ENST00000505809 469 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM38O00635 RNU6-64P-201ENST00000517119 105 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM38O00635 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM38O00635 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM38O00635 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM38O00635 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM38O00635 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM38O00635 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM38O00635 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM38O00635 RPL23AP84-201ENST00000571193 464 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AC025627.2-201ENST00000576220 160 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AC015917.1-201ENST00000579654 510 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM38O00635 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM38O00635 AC069200.1-201ENST00000609511 323 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AL132765.2-201ENST00000610812 351 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM38O00635 SNHG22-203ENST00000617833 660 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM38O00635 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM38O00635 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM38O00635 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM38O00635 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM38O00635 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TRIM38O00635 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM38O00635 GABPAP-201ENST00000419271 1356 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM38O00635 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TRIM38O00635 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM38O00635 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM38O00635 RNU5E-1-201ENST00000362477 120 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 RNU5A-1-201ENST00000362698 116 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 SNORD56.2-201ENST00000363242 71 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 SNORD46.1-201ENST00000364139 104 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 RNY4P34-201ENST00000364779 95 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 DEFB109C-201ENST00000382575 264 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 DEFB109B-201ENST00000382656 264 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 HMGN2P8-201ENST00000391458 268 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 RN7SKP156-201ENST00000410308 342 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 RNA5SP107-201ENST00000411358 122 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM38O00635 HMGB3P20-201ENST00000417997 600 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 TAAR7P-201ENST00000436141 242 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 HMGN2P16-201ENST00000456802 261 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 RN7SL93P-201ENST00000463035 293 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM38O00635 RN7SL323P-201ENST00000494712 295 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 AC026427.2-201ENST00000506228 536 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM38O00635 AL359273.1-201ENST00000510918 627 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 RNU6-352P-201ENST00000516908 107 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 RN7SKP289-201ENST00000517244 295 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 RNU6-840P-201ENST00000517275 65 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM38O00635 AC008489.1-201ENST00000524271 483 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM38O00635 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM38O00635 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM38O00635 OR4H12P-201ENST00000556269 907 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM38O00635 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM38O00635 MIR3944-201ENST00000581277 108 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM38O00635 MIR4293-201ENST00000584305 78 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 AP001029.3-201ENST00000588063 596 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM38O00635 AC245014.2-201ENST00000603689 287 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 AC246785.4-201ENST00000605374 287 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 SNORA51-201ENST00000606420 132 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 AC093788.1-201ENST00000609356 927 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 AC040896.1-201ENST00000613819 479 ntBASIC3.92□□□□□ -1.78
TRIM38O00635 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM38O00635 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM38O00635 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM38O00635 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM38O00635 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM38O00635 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM38O00635 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TRIM38O00635 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM38O00635 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM38O00635 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms