Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 RNA5SP331-201ENST00000364986 107 ntBASIC1.16□□□□□ -2.22
CNOT1A5YKK6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 PSPHP1-201ENST00000450062 261 ntBASIC1.16□□□□□ -2.22
CNOT1A5YKK6 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 MIR4723-201ENST00000585070 81 ntBASIC1.16□□□□□ -2.22
CNOT1A5YKK6 AC010487.4-201ENST00000637027 61 ntBASIC1.16□□□□□ -2.22
CNOT1A5YKK6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
CNOT1A5YKK6 AC018630.2-201ENST00000534866 2403 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CNOT1A5YKK6 Y_RNA.412-201ENST00000384001 104 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 MIR627-201ENST00000384979 97 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 RNA5SP465-201ENST00000391195 109 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 HNRNPDP2-201ENST00000406475 478 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 AC096632.1-201ENST00000427395 310 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.15□□□□□ -2.22
CNOT1A5YKK6 AC010285.1-201ENST00000470580 392 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 OR9N1P-202ENST00000494289 481 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.15□□□□□ -2.22
CNOT1A5YKK6 AC008739.2-201ENST00000597006 317 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 AL161912.3-201ENST00000605404 628 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 AC087588.2-201ENST00000617667 426 ntBASIC1.15□□□□□ -2.22
CNOT1A5YKK6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.15□□□□□ -2.23
CNOT1A5YKK6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CNOT1A5YKK6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CNOT1A5YKK6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
CNOT1A5YKK6 RNU6-600P-201ENST00000362524 99 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 MIR17-201ENST00000385012 84 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 AC008850.1-201ENST00000427546 362 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 AC097493.1-201ENST00000463958 372 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 AC113155.1-201ENST00000511141 769 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 RNU1-104P-201ENST00000517280 175 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 OR10V3P-201ENST00000525712 725 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 COX6CP3-201ENST00000580869 223 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 MIR6513-201ENST00000621188 64 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 AC110079.1-202ENST00000635213 138 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 MIR4496-201ENST00000635896 61 ntBASIC1.15□□□□□ -2.23
CNOT1A5YKK6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.15□□□□□ -2.23
CNOT1A5YKK6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CNOT1A5YKK6 AL359851.1-201ENST00000569460 4997 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 AC007098.1-201ENST00000420122 367 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 SNRPGP13-201ENST00000442212 177 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 AC010301.1-201ENST00000473936 355 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.14□□□□□ -2.23
CNOT1A5YKK6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.14□□□□□ -2.23
CNOT1A5YKK6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CNOT1A5YKK6 DUXAP9-208ENST00000622815 614 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
CNOT1A5YKK6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.14□□□□□ -2.23
CNOT1A5YKK6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.14□□□□□ -2.23
CNOT1A5YKK6 MTND5P10-201ENST00000603719 1809 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 AL354685.2-201ENST00000448218 1447 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 MIR524-201ENST00000385242 87 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 Z85995.1-201ENST00000415547 335 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 RPL21P66-201ENST00000426566 466 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 AC096571.1-202ENST00000506634 735 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 RNA5SP364-201ENST00000516938 78 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.14□□□□□ -2.23
CNOT1A5YKK6 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.14□□□□□ -2.23
CNOT1A5YKK6 AC123912.5-201ENST00000605470 343 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.14□□□□□ -2.23
CNOT1A5YKK6 MIR203B-201ENST00000636080 86 ntBASIC1.14□□□□□ -2.23
CNOT1A5YKK6 AC130650.2-201ENST00000618736 2403 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 RNU6-666P-201ENST00000363499 107 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 AC233728.2-201ENST00000425348 757 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 RPL30P14-201ENST00000482744 348 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 LDHBP3-201ENST00000514909 822 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 OR4R1P-201ENST00000529879 463 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 AC106791.2-201ENST00000604680 391 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 GPM6BP3-201ENST00000442797 145 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 AC009296.1-201ENST00000443146 155 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 ARL5AP2-201ENST00000444698 533 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 GAS5-AS1-201ENST00000602767 694 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.13□□□□□ -2.23
CNOT1A5YKK6 AC019131.2-201ENST00000609071 870 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.13□□□□□ -2.23
CNOT1A5YKK6 RNU4-65P-201ENST00000410473 140 ntBASIC1.12□□□□□ -2.23
CNOT1A5YKK6 SNRPEP10-201ENST00000420249 274 ntBASIC1.12□□□□□ -2.23
CNOT1A5YKK6 AL596276.1-201ENST00000434465 418 ntBASIC1.12□□□□□ -2.23
CNOT1A5YKK6 IFNA20P-201ENST00000436840 528 ntBASIC1.12□□□□□ -2.23
CNOT1A5YKK6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 NF1P3-201ENST00000457709 450 ntBASIC1.12□□□□□ -2.23
CNOT1A5YKK6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 Y_RNA.280-201ENST00000364765 112 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms