Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV27A0A087WT01 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV27A0A087WT01 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV27A0A087WT01 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV27A0A087WT01 AC010928.2-201ENST00000588017 287 ntBASIC1.45□□□□□ -2.18
TRAV27A0A087WT01 GAS5-AS1-201ENST00000602767 694 ntBASIC1.45□□□□□ -2.18
TRAV27A0A087WT01 AC013553.2-201ENST00000604244 589 ntBASIC1.45□□□□□ -2.18
TRAV27A0A087WT01 AC093838.1-201ENST00000613014 469 ntBASIC1.45□□□□□ -2.18
TRAV27A0A087WT01 AC009032.1-201ENST00000617574 431 ntBASIC1.45□□□□□ -2.18
TRAV27A0A087WT01 AC131280.1-202ENST00000624067 4211 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC004520.1-201ENST00000608362 1413 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 UBE2L2-201ENST00000254302 429 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 MIR504-201ENST00000385065 83 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AL627390.1-201ENST00000396055 340 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 NPM1P10-201ENST00000398310 865 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 RNU2-47P-201ENST00000410649 186 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 RNU2-15P-201ENST00000410692 191 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 Z85995.1-201ENST00000415547 335 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AL358453.1-201ENST00000422522 250 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 RPL32P28-201ENST00000443577 397 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 SSXP1-201ENST00000453640 473 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 USP9YP10-201ENST00000454868 628 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 SNORD121B-201ENST00000458838 81 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC113420.1-201ENST00000507903 571 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC011611.5-201ENST00000552477 578 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 CYCSP2-201ENST00000558168 301 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 MIR502-201ENST00000606349 86 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC004908.2-201ENST00000609090 574 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC010678.1-201ENST00000614118 713 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC116618.1-201ENST00000634617 774 ntBASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV27A0A087WT01 AC006026.1-201ENST00000444025 1803 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 U8.14-201ENST00000390843 143 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AL121978.1-201ENST00000402778 359 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AL512604.1-201ENST00000404812 257 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 POLHP1-201ENST00000411806 470 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AL133384.1-201ENST00000412744 351 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 SPA17P1-201ENST00000416656 452 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 TPTE2P1-204ENST00000435256 593 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 RPL26P6-201ENST00000440913 438 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 OR10R1P-201ENST00000441524 1141 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AL929288.2-201ENST00000446368 407 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 RPL23AP23-201ENST00000452590 471 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 RFC5P1-201ENST00000454419 874 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 MTCO1P42-201ENST00000457379 726 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AC092757.1-201ENST00000467293 467 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 RNU5F-8P-201ENST00000515941 111 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AC012414.2-201ENST00000559474 187 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 HMGN2P15-201ENST00000585707 270 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 NRBF2P1-201ENST00000587407 859 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AL671309.1-201ENST00000603750 544 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AC005296.1-201ENST00000616145 209 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AC068057.2-201ENST00000624047 895 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 HPVC1-201ENST00000629899 1198 ntBASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV27A0A087WT01 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 RNU2-43P-201ENST00000410306 190 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 UBE2V1P11-201ENST00000411559 285 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AL109913.1-201ENST00000421173 514 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AL356867.1-201ENST00000429623 299 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AL512661.1-201ENST00000434586 1253 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 THAP5P1-201ENST00000439089 262 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC016691.1-201ENST00000441321 413 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms